Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  209 bits (531), Expect = 3e-58
 Identities = 130/355 (36%), Positives = 205/355 (57%), Gaps = 6/355 (1%)

Query: 187 MGFATLIVTLVMIGLGVV---ISRAVIQPLDTIKDVMKKVAQG-DLTAQIPVLGKDELGI 242
           +  AT +  ++ + + +V   I RA+I P++ I  V+  V +  +LT +    G DE+  
Sbjct: 267 VAMATTLFAVIAVLVAIVTFMIIRAIITPINNINQVISHVGKDKNLTLRCDTQGGDEIAE 326

Query: 243 VAQRINNSIAAVHDALVESVQSASSVA-EAAIRIASSAEETSQAVVSQRDQLSQLATAMN 301
           + Q  N  + +   AL++ V  A +V  E+   ++++A + S  V+ Q ++   +ATA+ 
Sbjct: 327 IGQHFNEMVESFR-ALIQQVNDAVNVMNESCQELSANATQASDGVLRQLNETDMVATAIT 385

Query: 302 QMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKE 361
           +M AT+ ++A + E  A         A +G + V  +++ I++L+ +L  +   V +L+ 
Sbjct: 386 EMGATIDEIAKNTELAAERANHTHTNAQVGQQSVEQTIEKIQSLAQQLNNSASVVAELER 445

Query: 362 GVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDE 421
               I  V  VI GI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR+LA RT  ST+E
Sbjct: 446 DSGTIGSVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQESTEE 505

Query: 422 IQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATA 481
           I  +I  LQ    S    M+ SQ     S   A +AG+ L+ I   + ++ D +TQIA A
Sbjct: 506 IAGIIQTLQSRTRSIVQLMEASQRQGGESAEQAASAGTMLAQINQDVTNIMDMSTQIAAA 565

Query: 482 AEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
            EEQS+VA E+N+NV  I D A E S AA   A+ S+ + + +  L + ++ F++
Sbjct: 566 IEEQSSVAAEVNKNVVVIRDIAEESSHAAMANAKASDDVRERAEYLQRAVSQFRV 620