Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  217 bits (552), Expect = 1e-60
 Identities = 132/349 (37%), Positives = 200/349 (57%), Gaps = 5/349 (1%)

Query: 189 FATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQ-GDLTAQIPVLGKDELGIVAQRI 247
           FA LI +      GV ++R V+ P+  I+  ++++ +  D+T    V   DELG +A+ +
Sbjct: 197 FAVLITSF----FGVWVNRGVMTPVTEIRQKLRQIREKSDMTVSFTVFRDDELGHIAKDL 252

Query: 248 NNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATV 307
           N  +  +   L    ++AS++ ++A  +     + +  +  Q+ +  Q ATAMN+MTA V
Sbjct: 253 NGVVNHLKGILKNIAEAASTLGDSADELNEFTRQANDRMFKQQSETEQTATAMNEMTAAV 312

Query: 308 ADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQIS 367
           A+VA  +   A    +A + A  G+  V  S+ S+  L+ ++      + +L      I 
Sbjct: 313 AEVAQSSNSAAESARNADESAARGNSIVQQSISSMSVLASQIQGTAAVIGELATESQNIG 372

Query: 368 EVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMIN 427
            V  VI  I+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR LA RT  ST EI++MI 
Sbjct: 373 RVLDVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTSESTREIESMIE 432

Query: 428 RLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSA 487
            LQQ   S  ++M++  A   N+  +   AGS L  IV  +  ++   T IATAA+EQS 
Sbjct: 433 SLQQGVKSAVNSMEQGIAQVDNANESTNAAGSALQDIVASVDSITQLNTHIATAADEQSC 492

Query: 488 VAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
           VAE +N+++  I+D A E +QAA  L+E   +LA L+  +  ++  F L
Sbjct: 493 VAESINQSIIAISDIAQESTQAANDLSEAVHQLAQLAGHMRTQVGTFIL 541