Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  216 bits (549), Expect = 3e-60
 Identities = 129/346 (37%), Positives = 202/346 (58%), Gaps = 1/346 (0%)

Query: 192 LIVTLVMIGLGVVISRAVIQPLDTIKDVMKKV-AQGDLTAQIPVLGKDELGIVAQRINNS 250
           +++TLV+IG  + I R++++P+  I D + ++ A  DLT +      DE+G +A+  N+ 
Sbjct: 275 ILITLVLIGFTLAIIRSIMEPVQRISDAISRIEATKDLTLRCDTKVDDEIGQIARHFNSM 334

Query: 251 IAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVADV 310
           + +    + E + S   V  +   ++ ++   S+ V  Q ++   +ATA+ +M AT+ ++
Sbjct: 335 VESFQSLIREVLTSVEVVNHSCQELSENSMRASEGVGRQLNETDMVATAITEMGATIDEI 394

Query: 311 AGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISEVT 370
           A + E  A    +    A  G   V  +++ I+AL+ +L  +   V++L++    I  V 
Sbjct: 395 ASNTELAAERAGNTHDNAQQGQVGVEHTIEKIQALAAQLTDSAQVVSELEKDSETIGSVL 454

Query: 371 SVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMINRLQ 430
            VI GI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR+LA RT  ST+EI  +I  LQ
Sbjct: 455 DVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQESTEEIAGIIQTLQ 514

Query: 431 QLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSAVAE 490
               S    M+ +Q     S   A +AG+ L  I   + ++ D +TQIA A EEQS VA 
Sbjct: 515 SRTRSIVQLMEATQRQGIESADQAASAGALLEQINADVTNIMDMSTQIAAAIEEQSMVAS 574

Query: 491 EMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
           E+N+NV  I D A E +QAA   A+ S+ +   ++ L Q ++ FK+
Sbjct: 575 EVNKNVVVIRDIAAESAQAADENAKASDDVKARTQVLYQAVSLFKI 620