Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  229 bits (585), Expect = 2e-64
 Identities = 135/347 (38%), Positives = 208/347 (59%), Gaps = 1/347 (0%)

Query: 191 TLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQ-GDLTAQIPVLGKDELGIVAQRINN 249
           TL+  +  I LGV I+R+V++P++ I+  +  + Q  DLT     L KDELG+++  +N+
Sbjct: 195 TLVAAIASIVLGVWINRSVMKPINHIRTQLHTIQQDSDLTVTFEQLNKDELGLISTGLND 254

Query: 250 SIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVAD 309
               +   L    ++A+SV+++A+ +    + ++  +  Q+ +  Q ATAMN+MTATV +
Sbjct: 255 VFRHLRGILKGVAEAANSVSDSALALNEFTQISNARIQQQQAETEQTATAMNEMTATVNE 314

Query: 310 VAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISEV 369
           VA      A    +A + A  G+  V  S+ S++ALS+++   ++ +  L      I  V
Sbjct: 315 VAQSTTAAADSARNADRFAANGNDIVQLSISSMQALSMQIQSTSEVITHLSHESQHIGSV 374

Query: 370 TSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMINRL 429
            SVI GI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR+LA RT  +T EI+TMI  L
Sbjct: 375 LSVIKGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQEATQEIETMIETL 434

Query: 430 QQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSAVA 489
           Q       +AM        ++      AG  L  IV  + ++++  T IATAAEEQS+VA
Sbjct: 435 QSGVNEAVTAMDVGIKQVDDANQQTNKAGEALQEIVASVDNITEMNTHIATAAEEQSSVA 494

Query: 490 EEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
           E +NR++  I+D A + +++A  L     +L  L+  + Q++T F+L
Sbjct: 495 ESINRSIIAISDIASQSTESALELGHSIAQLTSLADSMRQQVTTFRL 541