Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 632 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  204 bits (518), Expect = 1e-56
 Identities = 129/393 (32%), Positives = 223/393 (56%), Gaps = 11/393 (2%)

Query: 152 DKLSF------VNGFAPWGWILGSGMLLDDIEHAVYQQFLRMGFATLIVTLVMIGLGVVI 205
           DKL F      VNG     W L  G+   +    V Q       ++ I+ L  I + + +
Sbjct: 242 DKLGFSKAIPLVNGKQ---WFLFIGLDKSNAYAVVDQALTSALVSSAIMLLCAISILLGV 298

Query: 206 SRAVIQPLDTIKDVMKKVAQG--DLTAQIPVLGKDELGIVAQRINNSIAAVHDALVESVQ 263
              + +P+ ++K ++ ++++G  DLT ++ +  +D+LG ++  IN  IA +   + E +Q
Sbjct: 299 LYLLYRPILSLKAMVTELSKGNGDLTKRLEIHCEDDLGQISMGINQFIANLQAMMREVLQ 358

Query: 264 SASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVADVAGHAEDTARDTLD 323
           +++ ++ +  R+    E     + +   +  Q+  A+ +M+AT  DVA +  +TA  T  
Sbjct: 359 ASAHISGSVERLNGETETNRHILSAHTKETEQIVAAVEEMSATANDVAQNGSETASFTQL 418

Query: 324 ASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISEVTSVISGISEQTNLL 383
            +++A    + V  + +++  L  E+    D++ ++    + I++V  VI  I++QTNLL
Sbjct: 419 TNEQALASKQVVAQATETVNRLVREVEHTADKIGQIDRDTINITQVLKVIGDIADQTNLL 478

Query: 384 ALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMINRLQQLAVSTASAMQKS 443
           ALNAAIEAARAG+QGRGFAVVADEVR LA+RT  ST EI+  ++ L+  + S   +M+ +
Sbjct: 479 ALNAAIEAARAGEQGRGFAVVADEVRALAARTQDSTAEIEETLSNLRDASNSAIHSMEVT 538

Query: 444 QALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSAVAEEMNRNVSGINDAA 503
           +     + +T E   +DL  I + +  ++D  TQIATAAEEQS+V+ E+ RN+S I D A
Sbjct: 539 KQTCLETASTTERVATDLDAIGSSVNQINDLNTQIATAAEEQSSVSAEITRNMSAICDMA 598

Query: 504 LEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
            E++++      E+  LA  ++QL+Q +  FKL
Sbjct: 599 NELARSGESSRNETVNLATANQQLEQIVGQFKL 631