Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  232 bits (592), Expect = 3e-65
 Identities = 131/348 (37%), Positives = 205/348 (58%), Gaps = 2/348 (0%)

Query: 191 TLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQG--DLTAQIPVLGKDELGIVAQRIN 248
           T+++    IGL   +S +V QP+  + D+++ + QG  DL  ++PV G DEL  +A+  N
Sbjct: 291 TVLIAAAFIGLSTFVSASVSQPIAKVADMLQDIGQGEGDLRQRLPVEGNDELAQLAKGFN 350

Query: 249 NSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVA 308
           + I  +  +++E   ++  ++ AA  +A+ A++T      Q+DQ   + TA+N+M ATV 
Sbjct: 351 SFIEKIQHSIIEVTDTSVQLSHAAKDVANQAQQTQDDSQLQKDQTMMVVTAINEMGATVH 410

Query: 309 DVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISE 368
           ++AG+A   A +  DA   ++ G   V  + D+I  LS ++    + +  L      I  
Sbjct: 411 EIAGNAAQAADNAKDADNASSNGQIVVTRARDTINQLSQDVEQVGNVIESLATHTTSIGS 470

Query: 369 VTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMINR 428
           +  VI  +S+QTNLLALNAAIEAARAG+ GRGFAVVA+EVRNLASRT  STDE+Q MI+ 
Sbjct: 471 ILDVIRAVSDQTNLLALNAAIEAARAGEAGRGFAVVAEEVRNLASRTAASTDEVQKMIDN 530

Query: 429 LQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSAV 488
           LQ  A     AM +S++ +   V   + A   L+ I   I  ++D   Q+A A EEQS V
Sbjct: 531 LQSEAARAVEAMTQSKSRSQEGVQAVDEASHTLTEISQQIGAITDMNIQVAAATEEQSTV 590

Query: 489 AEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
            E++NRNV+ I++     S+ +  +A+ S+ L  L+ +LD  +  FK+
Sbjct: 591 VEDINRNVTEISEITQRTSETSQAVAQASQSLNQLAHRLDTLVAGFKV 638