Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 549 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

 Score =  236 bits (603), Expect = 1e-66
 Identities = 155/548 (28%), Positives = 283/548 (51%), Gaps = 21/548 (3%)

Query: 6   NIKVSYKLAAIVIVGIVGFLSLLFISANALKENLVAEREARLKAVIQSTLSQVAYLNQT- 64
           N+++  ++  ++ + + G  ++  + A  +  +L    +  ++A +++  + +A      
Sbjct: 4   NLRLKSRMFILIALAVFGMGTITILGALGVSRDLHEGHQQTVRAAVEAAYNIIAGYQALE 63

Query: 65  ----LPKEQAQEQAKALINALRFDGNN----YMFVIDESRYTVVHPIRQDLVGQQMGNPG 116
               + + +AQ+ A   +   R+ G +    Y  +      TV+HPIR +  G+ +    
Sbjct: 64  KAGKMSRSEAQKAAVESVRMARYGGTDGRSEYFHIWTPEGVTVMHPIRPEWEGKDVTGEV 123

Query: 117 KDTEGQFWF-TMIDLARNGQQGSLIYPWKNQQGNPA----DKLSFVNGFAPWGWILGSGM 171
           +D +G+     +ID A     G+ +       G PA    DKL +V  FAPWGW++GSG+
Sbjct: 124 RDVKGRPTLRNIIDGAIKQPDGAFVETLFPHPGQPAEKAVDKLQYVKLFAPWGWVVGSGI 183

Query: 172 LLDDIEHAVYQQFLRMGFATLIVTLVMIGLGVVISRAVIQPLD----TIKDVMKKVAQGD 227
            LDD++  V Q+ L      L++  ++     ++ R+V+Q +        D+M++ A GD
Sbjct: 184 YLDDVQAEVRQRTLEDSLMALVLLALVAAGTYLVGRSVLQQVGGEPGVAIDLMRQAADGD 243

Query: 228 LTAQIPVLGKDELGIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVV 287
           LT ++        G +    ++ +A++   + E   ++S +   A RI+++A E S A  
Sbjct: 244 LTVRVETA---PAGSMLASFSHMVASLRQVVKEIGSNSSQLTHNAERISTAAREVSLAGE 300

Query: 288 SQRDQLSQLATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSV 347
            Q D  S +A A+ ++T ++  ++ ++ DT R++ ++++ A  G+  V ++  +I+A++ 
Sbjct: 301 QQSDATSAMAAAIEELTVSINHISDNSRDTERNSSESAQLAAEGETRVANASGAIKAIAG 360

Query: 348 ELGVATDQVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADE 407
            +  A+ ++  L+    ++S + SVIS I+ QTNLLALNAAIEAARAG+QGRGFAVVADE
Sbjct: 361 TVSDASGRIRDLETQTREVSGIASVISAIAAQTNLLALNAAIEAARAGEQGRGFAVVADE 420

Query: 408 VRNLASRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNH 467
           VR LA RT  +T EI+ MI+ +Q        AM  +     + VA AE A   L  I   
Sbjct: 421 VRQLAERTAKATVEIEQMISHIQTDTDMVVQAMGAALPQVESGVALAEEAAQSLRQIREG 480

Query: 468 IQHVSDKATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQL 527
            +    +   +A A  EQS+ +  + + V  +     E S A    AE +E +  ++ +L
Sbjct: 481 SELTLHRVRDVAEATMEQSSASTSIAQRVEQVAQMVEETSAAMKNTAETAEAVEQIASRL 540

Query: 528 DQKLTAFK 535
           D  +  F+
Sbjct: 541 DALVQRFR 548