Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  215 bits (547), Expect = 4e-60
 Identities = 135/352 (38%), Positives = 201/352 (57%), Gaps = 5/352 (1%)

Query: 187 MGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLTAQIPV--LGKDELGIVA 244
           +GF+T+   +VM  L   + R +  P+  +     +V+ G+LT ++ +    +DE G +A
Sbjct: 198 VGFSTIFFVVVMAFL---LIRQIQNPIMWLLKQTHEVSAGNLTNKLNMNAFARDEFGQLA 254

Query: 245 QRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMT 304
           +  N     +H  + E   S   ++ AA  I+S A  +S  + +Q+++L+QLATAM++M 
Sbjct: 255 ESFNEMQDNLHMLVSEVSNSIVQLSSAAEEISSVALHSSNNMETQQNELNQLATAMHEMQ 314

Query: 305 ATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVM 364
           ATV DVA +  D A     AS  A  G + V+ S+  I  ++  +      + KL +   
Sbjct: 315 ATVQDVARNTNDAANAATQASDTATQGSETVNDSIVRIDKVAGAIEATAVVIRKLGDDSR 374

Query: 365 QISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQT 424
            I  V  VI GI+EQTNLLALNAAIEAARAG+QGRGFAVVADEVR LA RT  ST  I +
Sbjct: 375 NIGMVLEVIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAKRTQDSTSHINS 434

Query: 425 MINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEE 484
           +I+ LQ  A      MQ+SQ +   +V  A  AG  ++ I + +  +S    QIATA EE
Sbjct: 435 IISELQLRANEAEETMQQSQEMMIETVCKAREAGESIAKISSSVSCISQMNIQIATATEE 494

Query: 485 QSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
           Q AV+EE+NRNV+ I+ A+ +++  A  +A     L+ L+ QL   +  F +
Sbjct: 495 QGAVSEELNRNVANISGASEDVATGAKQMAMACNDLSHLATQLQDMVKKFHI 546