Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  232 bits (591), Expect = 4e-65
 Identities = 141/363 (38%), Positives = 211/363 (58%), Gaps = 6/363 (1%)

Query: 176 IEHAVYQQFLRMGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQG--DLTAQIP 233
           +  AVYQ  +     TLI+    I L +V++ +V +P+  +  + + + +G  DL  ++P
Sbjct: 284 LRDAVYQILIW----TLIIAAGFIMLAIVVAGSVSRPIAQVAAMFRDIGEGEGDLRQRLP 339

Query: 234 VLGKDELGIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQL 293
           V GKDE+  +AQ  N+ I+ + D+++E  Q++  +  +A  +++ A++T +    Q+D+ 
Sbjct: 340 VNGKDEIAQLAQGFNSFISKIQDSVIEVAQTSEQLGLSAKDVSNQAQQTLEDSHEQKDRT 399

Query: 294 SQLATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVAT 353
             + TA+N+M ATV ++A +A   A    DA  E+N G   V  + D+I  LS ++    
Sbjct: 400 MMVVTAINEMGATVNEIASNAAQAAVAAKDADTESNSGQVVVTRARDTINQLSHDVEQVG 459

Query: 354 DQVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLAS 413
           + +  L      I  +  VI  ISEQTNLLALNAAIEAARAG+ GRGFAVVADEVRNLAS
Sbjct: 460 EVIESLATHTKSIGGILDVIRAISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAS 519

Query: 414 RTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSD 473
           RT  ST+E+Q MI++LQ  A    SAM +S+A +   V   + A   L  I   I  +SD
Sbjct: 520 RTAASTNEVQGMIDKLQSEASRAVSAMAQSRARSHEGVTAVDEASQSLVGISKRIGLISD 579

Query: 474 KATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTA 533
              Q+A A EEQS V E++NRNV+ IND     +  A   A+ S  L  L+ +LD  +  
Sbjct: 580 MNIQVAAATEEQSTVVEDINRNVTEINDITQRTASTAQAAAQASLALNQLAHRLDTLVAK 639

Query: 534 FKL 536
           FK+
Sbjct: 640 FKV 642