Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  233 bits (594), Expect = 2e-65
 Identities = 143/355 (40%), Positives = 200/355 (56%), Gaps = 3/355 (0%)

Query: 183 QFLRMGF-ATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLTAQIPVLGKDELG 241
           + + +GF A LI T +   +   I+R + +  + + D+ +   +GDLT +I V  KDE+ 
Sbjct: 282 KLIMIGFIAFLIGTAIAWFIAKSITRPIAETTNALNDIAE--GEGDLTRRIEVKSKDEIA 339

Query: 242 IVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMN 301
            +A   N     +H  + +   S S +A +A  +++   ET Q    Q  +  Q+ATAMN
Sbjct: 340 QLALAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITNETQQMAKRQHLETEQVATAMN 399

Query: 302 QMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKE 361
           +M ATV +VA +A D A     AS+    G   V   + +I  L+ E+  A   +N+L+ 
Sbjct: 400 EMAATVQEVAHNATDAADAATHASESTEHGKLLVEKVISTISLLADEIAHAAKAINELER 459

Query: 362 GVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDE 421
              QI  V  VI  I++QTNLLALNAAIEAARAG+QGRGFAVVADEVR LASRT  ST E
Sbjct: 460 NTAQIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQASTSE 519

Query: 422 IQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATA 481
           IQ MI  LQ  A ST S M  S A   N V+    AG  L  I   +  +S    QIA+A
Sbjct: 520 IQQMIEALQHSAKSTVSTMNTSTATTQNCVSLVHEAGEALEAITQAVSTISQMNIQIASA 579

Query: 482 AEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
           A EQ AV+ E+N+NV+ IND  +  +++A   A   ++LA LS +L   L  F++
Sbjct: 580 ANEQCAVSAEINKNVNNINDITINATESAVQTARAGDELAQLSMRLTTLLAQFRI 634