Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 505 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  222 bits (566), Expect = 2e-62
 Identities = 132/345 (38%), Positives = 198/345 (57%), Gaps = 1/345 (0%)

Query: 193 IVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQGDLTAQIPVLG-KDELGIVAQRINNSI 251
           ++  V+      IS  V   L T    +K+ A GDLT ++     KDE  ++A  I+  +
Sbjct: 161 VLLFVLFLFSYYISTFVGGALYTTVMALKRAASGDLTGRLNFFEVKDEFSLLAISIDTLV 220

Query: 252 AAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVADVA 311
              H+ + +  +S   + E      ++A++     V+QR  L  LATAM +MTA V +VA
Sbjct: 221 ERQHNLVKQIAESTFKIREVVSSFRNTAQQGQALAVNQRQHLDSLATAMEEMTAAVKEVA 280

Query: 312 GHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISEVTS 371
            +AE +  +T +A+++ N G KD+ ++V +I  LS E+  A++ VN L +   +I EV S
Sbjct: 281 RNAEQSCAETQEANQQVNAGSKDIETTVSAIDVLSDEISAASNAVNTLNDKASKIDEVVS 340

Query: 372 VISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMINRLQQ 431
            I+ IS+QTNLLALNAAIEAARAG+QGRGFAVVADEVR LA RT  +T EI++MI  LQQ
Sbjct: 341 TINAISQQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAGRTQAATVEIKSMIESLQQ 400

Query: 432 LAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSAVAEE 491
              +    M ++ + A+         G DL  I +H   V + +  IAT+AEEQSAVA E
Sbjct: 401 GTRNLTQVMSRTVSQASEGKQHVLKTGKDLQSIAHHSSRVFEMSVLIATSAEEQSAVANE 460

Query: 492 MNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
           +  N+  I + + ++ Q+A       ++L   + QLDQ +   K+
Sbjct: 461 IATNLMEIRNQSHDVEQSANQSVSGCDELQATAGQLDQLMVGLKV 505