Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  226 bits (575), Expect = 3e-63
 Identities = 142/365 (38%), Positives = 217/365 (59%), Gaps = 5/365 (1%)

Query: 173 LDDIEHAVYQQFLRMGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQ--GDLTA 230
           +DD+  ++    + +G A  I+ +V I    ++ R+VI PL  I+  ++ +A   GDLT 
Sbjct: 344 MDDMATSLGSILVIVGLAVSILAVVTIS---IVIRSVIAPLRLIQGRVENLASADGDLTQ 400

Query: 231 QIPVLGKDELGIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQR 290
            I V    EL  + +  N+ I  + D + E    A    E ++  A  AE T  +V  Q 
Sbjct: 401 SIEVDSHAELIALGKGFNSFIHKLKDLISELKALAGQTQEESLSSAKIAELTRDSVHRQY 460

Query: 291 DQLSQLATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELG 350
            ++  + TA+N+M+AT  +VA  +E TA +T   S+  +L ++ +  ++D +  +S E  
Sbjct: 461 GEIESVVTAVNEMSATALEVAKASEQTAAETEAMSRNVHLSEESLTKAMDYVTTMSQESM 520

Query: 351 VATDQVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRN 410
            A   V+K+ E    IS +  VIS I+ QTNLLALNAAIEAARAG+QGRGFAVVADEVR 
Sbjct: 521 QAKVAVSKVAESSTNISRILEVISSIAAQTNLLALNAAIEAARAGEQGRGFAVVADEVRA 580

Query: 411 LASRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQH 470
           LAS+T  STD+I  +I+ LQ+   S ++ + K    A  +V+  E A + L+ +V+ I+ 
Sbjct: 581 LASKTQSSTDDISVLIDALQKEVQSASAIIDKGAERAQMAVSQTEQALTSLNSMVSQIEE 640

Query: 471 VSDKATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQK 530
           +S + T IA AAEEQSAV EE+NRN++GI+D+A E+++ A    + S  LA+L +Q  Q+
Sbjct: 641 ISAQVTHIAAAAEEQSAVTEEVNRNITGISDSASELARLAGEAQQSSVVLAELVKQQHQQ 700

Query: 531 LTAFK 535
           L   K
Sbjct: 701 LGKLK 705