Pairwise Alignments
Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056
Subject, 749 a.a., methyl-accepting chemotaxis protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710
Score = 220 bits (560), Expect = 2e-61
Identities = 154/526 (29%), Positives = 256/526 (48%), Gaps = 60/526 (11%)
Query: 69 QAQEQAKALINALRFDGNNYMFVIDESRYTVVHPIRQDLVGQQMGNPGKDTEGQFWFT-M 127
Q +++A I +R NY +V D Y V+HP+R +L G + D EG+ F M
Sbjct: 223 QLKQEALDQIARIRLSDGNYFWVNDLRPYMVMHPVRPELDGTDLSRT-TDAEGKLLFVEM 281
Query: 128 IDLARNGQQGSLIYPWKNQQGNPAD--KLSFVNGFAPWGWILGSGMLLDDIEHAVYQQ-- 183
+AR+ G++ Y + + G D KLS+V F PWGW++G G+ +DD++ + +
Sbjct: 282 AKVARDKGAGTVAYRF-GKPGAAGDFPKLSYVKLFEPWGWVIGKGVYMDDVDREIVAEQE 340
Query: 184 ---------FLRMGFATLIVTLVMIGLGV-VISRAVIQPLDTIKDVMKKVAQGDLTAQIP 233
R G L++ M+GL + I + QP++ + +VA G+L A +
Sbjct: 341 RFSQAIGGLMTRSGLIGLMIATTMVGLVLFYIHYRLRQPMNQLVRYAGQVASGELDASVS 400
Query: 234 VLGKDELGIVAQRINNSIAAVHDALVESVQS----------------------------- 264
+ EL ++A + + +A++ + + E+
Sbjct: 401 GRFQGELLLLADALRSMVASLGERMEEAQLKGRLAEEEAAHARAATAEADDARRKAEGAK 460
Query: 265 --------------ASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVADV 310
+S+ +A+ ++A+ +EE S QR ++++ ATAM +M AT+ +V
Sbjct: 461 AEGMLAAAGILDTIVTSLTQASQKVAALSEEISDGAEGQRQRITETATAMEEMNATILEV 520
Query: 311 AGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISEVT 370
AG++ A + A A G +SV +I + V +L I +
Sbjct: 521 AGNSSKAAENADHARGRAEEGASTASASVAAIEEVQRLADALKVNVAELGVKAEAIGRII 580
Query: 371 SVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMINRLQ 430
+VI+ I++QTNLLALNAAIEAARAGD GRGFAVVADEVR LA +T H+T E+ I +Q
Sbjct: 581 NVINDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMHATSEVGEAIRAIQ 640
Query: 431 QLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSAVAE 490
Q +++++ A + +G LS IV + +D+ IATA+EEQSA +E
Sbjct: 641 QATRDNTHSVERAAAAVDKATELVVRSGKALSEIVVLSEQSADRVRSIATASEEQSAASE 700
Query: 491 EMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
E+ R + IN + +++ A ++ R+L++ + KL
Sbjct: 701 EITRALDEINGLSGRITEGIGQAAGAQRDMSQQCRKLNELIEKIKL 746
Score = 74.7 bits (182), Expect = 1e-17
Identities = 115/543 (21%), Positives = 205/543 (37%), Gaps = 64/543 (11%)
Query: 37 ENLVAEREARLKAVIQSTLSQVAYLNQTLPKEQAQEQAK---ALINALRFDGNNYMFVID 93
E L + LK V+ + S V P+E+ A+ A + LRF G+NY++V D
Sbjct: 77 EALKRLKRDELKLVVDAAASMVQAQVAAAPQERKAFVAREMLASLRGLRFAGDNYLWVND 136
Query: 94 ESRYTVVHPIRQDLVGQQMGNPGKDTEGQFWFT-MIDLARNGQQGSLIYPW-KNQQGNPA 151
++HP+ + G+ + +D +G+ FT + +AR+ +G + Y W + Q P
Sbjct: 137 LDTVVLMHPVSPQMEGKPQRDI-RDEQGKAIFTEFVSIARSKGEGMVDYMWPRPGQKQPQ 195
Query: 152 DKLSFVNGFAPWGWILGSGMLLDDIEHAVYQQFLRMGFATLIVTLVMIGLGVVISRAVIQ 211
K+SFV GW++G+G LDD+ + Q+ L + + + G ++
Sbjct: 196 VKVSFVKLIPELGWVVGAGAYLDDMTAQLKQEALDQ------IARIRLSDGNYFWVNDLR 249
Query: 212 PLDTIKDVMKKVAQGDLTAQIPVLGK------------DELGIVAQRINNSIAAVHDALV 259
P + V ++ DL+ GK G VA R AA +
Sbjct: 250 PYMVMHPVRPELDGTDLSRTTDAEGKLLFVEMAKVARDKGAGTVAYRFGKPGAAGDFPKL 309
Query: 260 ESVQ----------SASSVAEAAIRIASSAEETSQAV--VSQRDQL--SQLATAM----- 300
V+ + + I + E SQA+ + R L +AT M
Sbjct: 310 SYVKLFEPWGWVIGKGVYMDDVDREIVAEQERFSQAIGGLMTRSGLIGLMIATTMVGLVL 369
Query: 301 ----NQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELG------ 350
++ + + +A A LDAS ++ D++R++ LG
Sbjct: 370 FYIHYRLRQPMNQLVRYAGQVASGELDASVSGRF-QGELLLLADALRSMVASLGERMEEA 428
Query: 351 -----VATDQVNKLKEGVMQISEVTSVISGISEQTNLLA---LNAAIEAARAGDQGRGFA 402
+A ++ + + + G + L A L+ + + Q A
Sbjct: 429 QLKGRLAEEEAAHARAATAEADDARRKAEGAKAEGMLAAAGILDTIVTSLTQASQ--KVA 486
Query: 403 VVADEVRNLASRTHHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLS 462
+++E+ + A E T + + + A K+ A ++ AE S S
Sbjct: 487 ALSEEISDGAEGQRQRITETATAMEEMNATILEVAGNSSKAAENADHARGRAEEGASTAS 546
Query: 463 LIVNHIQHVSDKATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLAD 522
V I+ V A + E AE + R ++ IND A + + A A E+ + D
Sbjct: 547 ASVAAIEEVQRLADALKVNVAELGVKAEAIGRIINVINDIADQTNLLALNAAIEAARAGD 606
Query: 523 LSR 525
R
Sbjct: 607 AGR 609