Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 634 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  241 bits (615), Expect = 6e-68
 Identities = 146/362 (40%), Positives = 208/362 (57%), Gaps = 2/362 (0%)

Query: 177 EHAVYQQFLRMGFATLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQG--DLTAQIPV 234
           E A+    L++    +I  L+   +   I++++ +P+    D +  +A+G  DLT +I V
Sbjct: 273 EQAMSDIRLKLIMIGVIALLIGTAIAWFIAKSITRPIAETTDALNDIAEGEGDLTRRIEV 332

Query: 235 LGKDELGIVAQRINNSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLS 294
             KDE+  +AQ  N     +H  + +   S S +A +A  +++   ET Q    Q  +  
Sbjct: 333 KSKDEMAQLAQAFNRFAEKIHATVAQVSDSTSLLATSAEEMSAITHETQQMANRQHLETE 392

Query: 295 QLATAMNQMTATVADVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATD 354
           Q+ATAMN+M ATV +VA +A D A     AS+    G   V   + +I  L+ E+  A +
Sbjct: 393 QVATAMNEMAATVQEVAHNATDAADAATHASESTEQGKLLVEKVISTISLLADEIAQAAN 452

Query: 355 QVNKLKEGVMQISEVTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASR 414
            +N+L+    QI  V  VI  I++QTNLLALNAAIEAARAG+QGRGFAVVADEVR LASR
Sbjct: 453 AINELERNTTQIDSVLVVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASR 512

Query: 415 THHSTDEIQTMINRLQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDK 474
           T  ST EIQ MI  LQQ A +T S+M  S A   + V+    AGS L  I   +  +S  
Sbjct: 513 TQASTTEIQQMIETLQQSAKATVSSMNTSTATTQSCVSLVHEAGSALEAITQAVSTISQM 572

Query: 475 ATQIATAAEEQSAVAEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAF 534
             QIA+AA EQ AV+ E+N+NV+ IND A   +++A   A   ++LA LS +L   L+ F
Sbjct: 573 NIQIASAANEQCAVSAEINKNVNNINDIATNATESAMQTARAGDELAQLSMRLTTLLSQF 632

Query: 535 KL 536
           K+
Sbjct: 633 KI 634