Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  209 bits (533), Expect = 1e-58
 Identities = 129/394 (32%), Positives = 221/394 (56%), Gaps = 14/394 (3%)

Query: 145 NQQGNPADKLSFVNGFAPWGWILGSGMLLDDIEHAVYQQFLRMGFATLIVTLVMIGLGVV 204
           + QGNP  +L+      P         +   +   +   FL+   A LI+   ++ + ++
Sbjct: 114 SDQGNPTGRLTIAFSTLP---------VKAQLSDLLLGYFLQ---ALLILAGSLLVIFII 161

Query: 205 ISRAVIQPLDTIKDVMKKVAQGD--LTAQIPVLGKDELGIVAQRINNSIAAVHDALVESV 262
           + R VI PLD +   ++++A GD  L+ ++PV  +DE+G +A   N  +  +H  +    
Sbjct: 162 LKRLVISPLDKVVAALEEIANGDGDLSHRLPVESEDEIGKLANAFNGFVEQIHGTITRVH 221

Query: 263 QSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVADVAGHAEDTARDTL 322
           +++  +   A  + + ++  +Q V +Q  +     TA+ Q++A+  +VA +A+ TA    
Sbjct: 222 ETSGLLLGDAKALGTLSQSNNQRVQAQLKETEAAVTAVTQLSASANEVAINAKRTADAAT 281

Query: 323 DASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISEVTSVISGISEQTNL 382
            A +  + G +   S +   R L+ EL  +   V++L++   +I EV  VIS I+EQTNL
Sbjct: 282 QADRAVDDGQRQFDSGLAITRQLAGELARSAQSVSQLQQETQRIDEVVVVISSIAEQTNL 341

Query: 383 LALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMINRLQQLAVSTASAMQK 442
           LALNAAIEAARAG+QGRGFAVVADEVR+LASRT  +T EIQ MI ++Q     T + MQ 
Sbjct: 342 LALNAAIEAARAGEQGRGFAVVADEVRSLASRTQQATGEIQKMIQQVQSRVAETVNVMQS 401

Query: 443 SQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSAVAEEMNRNVSGINDA 502
           SQ L+   V  +E     LS + + + ++S+   +++ AA+EQ+ V E ++R ++ + + 
Sbjct: 402 SQTLSNQGVNRSEEIKLVLSKVTDLVSNISNMNIEVSHAAQEQTCVTEAISRTLNDLANV 461

Query: 503 ALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
           +   S  + +LA+ SE+L     +L   +T+F+L
Sbjct: 462 SGSASLDSEHLAQSSERLFHQGERLRTLVTSFRL 495