Pairwise Alignments

Query, 536 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  229 bits (585), Expect = 2e-64
 Identities = 135/348 (38%), Positives = 207/348 (59%), Gaps = 2/348 (0%)

Query: 191 TLIVTLVMIGLGVVISRAVIQPLDTIKDVMKKVAQG--DLTAQIPVLGKDELGIVAQRIN 248
           TLI+    I L +V++ +V +P+  +  + + + +G  DL  ++PV G+DE+  +AQ  N
Sbjct: 291 TLIIAAGFIMLAIVVAGSVSRPIAQVAAMFRDIGEGEGDLRQRLPVKGEDEIAQLAQGFN 350

Query: 249 NSIAAVHDALVESVQSASSVAEAAIRIASSAEETSQAVVSQRDQLSQLATAMNQMTATVA 308
           + I+ + D+++E  Q++  +  +A  +++ A++T +    Q+D+   + TA+N+M ATV 
Sbjct: 351 SFISKIQDSVIEVAQTSEQLGFSAKDVSNQAQQTLEDSHEQKDRTMMVVTAINEMGATVN 410

Query: 309 DVAGHAEDTARDTLDASKEANLGDKDVHSSVDSIRALSVELGVATDQVNKLKEGVMQISE 368
           ++A +A   A    DA  E+N G   V  + D+I  LS ++    + +  L      I  
Sbjct: 411 EIASNAAQAAVAAKDADTESNSGQVVVTRARDTINQLSQDVEQVGEVIESLATHTKSIGG 470

Query: 369 VTSVISGISEQTNLLALNAAIEAARAGDQGRGFAVVADEVRNLASRTHHSTDEIQTMINR 428
           +  VI  ISEQTNLLALNAAIEAARAG+ GRGFAVVADEVRNLASRT  ST+E+Q MI++
Sbjct: 471 ILDVIRAISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAASTNEVQGMIDK 530

Query: 429 LQQLAVSTASAMQKSQALAANSVATAENAGSDLSLIVNHIQHVSDKATQIATAAEEQSAV 488
           LQ  A    +AM +S+A +   VA  + A   L  I + I  +SD   Q+A A EEQS V
Sbjct: 531 LQSEASRAVNAMAQSRARSHEGVAAVDEASQSLVGISDRIGLISDMNIQVAAATEEQSTV 590

Query: 489 AEEMNRNVSGINDAALEMSQAATYLAEESEKLADLSRQLDQKLTAFKL 536
            E++NRNV+ IN+     +  A   A+ S  L  L+ +LD  +  FK+
Sbjct: 591 VEDINRNVTEINEITQRTASTAQAAAQASLALNQLAHRLDTLVAKFKV 638