Pairwise Alignments

Query, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., ABC transporter (iron.B12.siderophore.hemin) , permease component from Pseudomonas fluorescens FW300-N2E2

 Score =  190 bits (482), Expect = 5e-53
 Identities = 112/285 (39%), Positives = 169/285 (59%), Gaps = 6/285 (2%)

Query: 50  WSSLEQQLVWELRLPRLLAAAVIGASLAVAGATLQVLLGNVLAEPGVVGVSGGASVAMVI 109
           WS  ++ +VW +R+PRLL  A++GA LA+ GA LQ +  N LA+P ++GV+ GA++  VI
Sbjct: 53  WSPGQEHIVWLIRVPRLLLGALVGAGLALIGAVLQAVTRNPLADPHLLGVTSGATLGAVI 112

Query: 110 LLLFFPSLNSPVAFMAAAVLGALLFTLL-LVVMARKLRLTTARLLLVGVALGILSGAVVT 168
           ++L    +   +    AA +GALL  LL L + AR+ RL + RLLL GVA+  +  A   
Sbjct: 113 VVLHVGEIVGLLTLPLAAFIGALLSMLLVLTIAARQGRLESDRLLLCGVAVSFVMMAAAN 172

Query: 169 WAFYFSDDLGLRQLMYWLMGSVAGVSWYQHLLSLVAVPVVIWLVLQGGV---LDKLMLGE 225
              +  D      +M+W++G +    W   LL++ A  VV+ LVL  G+   L+ LM GE
Sbjct: 173 LLLFLGDHRASSAVMFWMLGGLGLARW--ELLAVPAASVVLGLVLLLGMARPLNALMAGE 230

Query: 226 GHAKQLGIDIHRVRWRLILAIALLVGASVALGGVIGFVGLVVPHLLRLTLGSENRLLLPL 285
             A  LG++  +VR  + L  +L+ G  V++ G IGFVGL+VPH+ R  +G+E+R LLP 
Sbjct: 231 QTAVTLGLNAAKVRLWIFLIASLMTGVLVSISGSIGFVGLMVPHIARRLVGAEHRRLLPA 290

Query: 286 SALCGALLLVSADLIARLALGSGELPLGVVTTTLGAPIFIWMLVR 330
             L G+L LV  D+ AR  +   +LP+GV T  +G   FI ++ R
Sbjct: 291 CVLLGSLFLVWVDVAARTLIAPEDLPIGVATAAIGGLFFIGLMRR 335