Pairwise Alignments

Query, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., Iron(III) dicitrate transport system permease protein FecD (TC 3.A.1.14.1) from Pseudomonas fluorescens FW300-N2E2

 Score =  173 bits (439), Expect = 5e-48
 Identities = 114/320 (35%), Positives = 173/320 (54%), Gaps = 11/320 (3%)

Query: 22  SYLLIGLFLSVCVLYLL-VGELWLSPFSAWSSL---------EQQLVWELRLPRLLAAAV 71
           S LL+ + +    LY L VG   LS    W +L          + L+WELRLPR+L A +
Sbjct: 26  SVLLLMVAVVALALYALTVGSYSLSVAQVWQALLAPEQVNSTMRNLLWELRLPRVLLAVL 85

Query: 72  IGASLAVAGATLQVLLGNVLAEPGVVGVSGGASVAMVILLLFFPSLNSPVAFMAAAVLGA 131
            GA++++AG  +Q L  N LA PG+VGV  GASV M+++++ +P+L     +  AA+ G 
Sbjct: 86  AGAAMSLAGLLMQSLTRNPLAAPGLVGVESGASVTMLLIIVLWPALLPLEFYPLAALAGG 145

Query: 132 LLFTLLLVVMARKLRLTTARLLLVGVALGILSGAVVTWAFYFSDDLGLRQLMYWLMGSVA 191
           L     + +++ +  ++  RL+LVGV L  +  AV      + +   +   + WL GS+ 
Sbjct: 146 LAVAFFVALLSWRQGISPLRLILVGVGLTAMLSAVADLLITYGNIDQVESALMWLGGSLH 205

Query: 192 GVSWYQ-HLLSLVAVPVVIWLVLQGGVLDKLMLGEGHAKQLGIDIHRVRWRLILAIALLV 250
             SW Q H L L  +   + L+     L+ L LGE  A   G+++  +   L+L   +L 
Sbjct: 206 RASWPQVHSLGLWLLVAGVPLLFCHRQLNLLQLGEKVALSRGLNVTWIMVSLLLCSVMLT 265

Query: 251 GASVALGGVIGFVGLVVPHLLRLTLGSENRLLLPLSALCGALLLVSADLIARLALGSGEL 310
            A+VA  G + FVGLV PHL R   G  +  L+PLSAL GALL+++ D + R  L   +L
Sbjct: 266 AAAVANVGTMTFVGLVAPHLARQMAGDRHGALIPLSALVGALLVLAGDTLGRGLLPPLQL 325

Query: 311 PLGVVTTTLGAPIFIWMLVR 330
           P G+V   +GAP  I +L R
Sbjct: 326 PAGLVVAIIGAPYLIVLLAR 345