Pairwise Alignments

Query, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

 Score =  179 bits (455), Expect = 7e-50
 Identities = 103/288 (35%), Positives = 170/288 (59%), Gaps = 12/288 (4%)

Query: 50  WSSLEQQLVWELRLPRLLAAAVIGASLAVAGATLQVLLGNVLAEPGVVGVSGGASVAMVI 109
           W++ ++ +VW +R PR+L  A+ GA LA+ G+ LQ    N LA+P ++G + GA++  VI
Sbjct: 63  WTTGQETIVWLIRTPRVLLGALAGAGLALIGSVLQAATRNPLADPHLLGATSGATLGAVI 122

Query: 110 LLLFFPSLNSPVAFMAAAVLGALL-FTLLLVVMARKLRLTTARLLLVGVALGILSGAVVT 168
           +++    +   +    AA +G+L+   L+L + + + RL + RLLL GVA+  +  A+  
Sbjct: 123 VVMHVGEVFGMLTLPLAAFVGSLVSLCLVLWLASHQGRLDSQRLLLGGVAVSFVMMAIAN 182

Query: 169 WAFYFSDDLGLRQLMYWLMGSVAGVSWYQHLLSLVAVPVVI----WLVLQG--GVLDKLM 222
            + +  D      +++W++G +    W      L+AVP +     W++LQG    L+ LM
Sbjct: 183 LSLFLGDHRANSSVLFWMLGGLGLARW-----ELLAVPFITVLCGWILLQGLGRSLNALM 237

Query: 223 LGEGHAKQLGIDIHRVRWRLILAIALLVGASVALGGVIGFVGLVVPHLLRLTLGSENRLL 282
            G+  A  LG+ +  +R  + L  +L+ G  VAL G IGFVGL+VPH+ R  +GSE+R L
Sbjct: 238 GGDQTAVSLGLQVRNMRLLVFLIASLMTGVLVALCGSIGFVGLMVPHMARRLVGSEHRRL 297

Query: 283 LPLSALCGALLLVSADLIARLALGSGELPLGVVTTTLGAPIFIWMLVR 330
           LP++ L GALL+V  D+I+R  +   +LP+G+ T  LG   FI+M+ R
Sbjct: 298 LPVATLLGALLMVWVDVISRTLIAPEDLPIGITTALLGGLFFIFMMKR 345