Pairwise Alignments

Query, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

Subject, 340 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

 Score =  181 bits (458), Expect = 3e-50
 Identities = 110/306 (35%), Positives = 178/306 (58%), Gaps = 8/306 (2%)

Query: 34  VLYLLVGELWLSPFSAWSSLEQQLVWELRLPRLLAAAVIGASLAVAGATLQVLLGNVLAE 93
           V  +L  +LW + +     +++ +VW  RL R + AA  GA LA+ G  LQ LL N LA+
Sbjct: 37  VFQVLANKLWAASY-VLDPIDEGIVWNYRLTRAIVAAACGAGLAICGVVLQSLLRNPLAD 95

Query: 94  PGVVGVSGGASV-AMVILLLFFPSLNSPVAFMAAAVLGALLFTLLLVVMARKLRLTTA-- 150
           P ++G+S GAS  A+++ +L F +    ++  A A +GA+    L+ ++A   R TTA  
Sbjct: 96  PYLLGISAGASTGAVLVAILGFGA--GAISMSAGAFVGAVAAFSLVALLAHSSRGTTAAG 153

Query: 151 RLLLVGVALGILSGAVVTWAFYFS-DDLGLRQLMYWLMGSVAGVSWYQHLLSLVAVPVVI 209
           +++L G+A   L  A+ ++    S      R +M+WL+G+++GV W+   L++  V V +
Sbjct: 154 QIILAGIAGSQLFNALTSFLITKSASSEQARGIMFWLLGNLSGVRWHSVWLAVPTVLVGL 213

Query: 210 WLVL-QGGVLDKLMLGEGHAKQLGIDIHRVRWRLILAIALLVGASVALGGVIGFVGLVVP 268
            + L     LD    G   A  LGI + RV+  LI   AL+    V++ G IGFVGLV+P
Sbjct: 214 LVCLWHRRALDAFTFGSDSAASLGIAVRRVQIILITTAALVTAVMVSIVGSIGFVGLVIP 273

Query: 269 HLLRLTLGSENRLLLPLSALCGALLLVSADLIARLALGSGELPLGVVTTTLGAPIFIWML 328
           H +R+ +G  +  L+PLSAL GAL L++AD+++R  +    LP+GV+T  +GAP+F  +L
Sbjct: 274 HAVRMLVGVRHARLVPLSALSGALFLIAADILSRTLIKGQALPIGVITALIGAPVFALIL 333

Query: 329 VRNHDS 334
            R + +
Sbjct: 334 TRGNST 339