Pairwise Alignments

Query, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., transport system permease protein from Pseudomonas syringae pv. syringae B728a

 Score =  156 bits (395), Expect = 6e-43
 Identities = 117/318 (36%), Positives = 176/318 (55%), Gaps = 20/318 (6%)

Query: 28  LFLSVCV-LYLLVGELWLSPF----SAWS----SLEQQLVWELRLPRLLAAAVIGASLAV 78
           L L  C+ L L  G  W+SP     S W     S  + ++ + RL R L A  +G+SLAV
Sbjct: 12  LILVACMGLSLATGATWISPADIVRSVWQPDALSAIEHVLLDTRLTRTLMAVAVGSSLAV 71

Query: 79  AGATLQVLLGNVLAEPGVVGVSGGASVAMVIL--LLFFPSLNSPV--AFMAAAVLGALLF 134
           AGA +Q L  N LA PG+ G++ GA+ A++    LL   S++  +  AF+ AAV G +++
Sbjct: 72  AGALMQALTRNPLASPGLFGINAGATFAIIACSSLLTLSSMSQWLWCAFIGAAVAGTIVW 131

Query: 135 TLLLVVMARKLRLTTARLLLVGVALGILSGAVVTWAFYFSDDLGLRQLMYWLMGSVAG-- 192
              ++    +  L   R++L G A+  L  A        + D GL  +++WL GS++   
Sbjct: 132 ---VIGNRGQGSLNPLRIVLAGAAITALFTAFSQALLVVNQD-GLDTVLFWLAGSLSERE 187

Query: 193 VSWYQHLLSLVAVPVVIWLVLQGGVLDKLMLGEGHAKQLGIDIHRVRWRLILAIALLVGA 252
           +S    LL  V + +   LVL G V + L  GE  A  LG     +R  + + I  L G+
Sbjct: 188 LSTAAPLLVCVVMGLAGALVLAGQV-NVLNTGEAIATALGQRTGLIRLMMSVVIIALAGS 246

Query: 253 SVALGGVIGFVGLVVPHLLRLTLGSENRLLLPLSALCGALLLVSADLIARLALGSGELPL 312
           +VAL G IGF+GL+VPH++R TL  ++R LLP  A+ GA LL+ AD +AR+ +   E+P+
Sbjct: 247 AVALAGSIGFIGLLVPHMVRKTLSIDHRWLLPGCAVLGATLLLLADTLARVVIVPQEVPV 306

Query: 313 GVVTTTLGAPIFIWMLVR 330
           GV+T   GAP FI ++ R
Sbjct: 307 GVMTALFGAPFFIALVRR 324