Pairwise Alignments

Query, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

Subject, 324 a.a., bacterial transport system permease protein from Marinobacter adhaerens HP15

 Score =  190 bits (482), Expect = 5e-53
 Identities = 115/284 (40%), Positives = 172/284 (60%), Gaps = 9/284 (3%)

Query: 51  SSLEQQLVWELRLPRLLAAAVIGASLAVAGATLQVLLGNVLAEPGVVGVSGGASVAMVIL 110
           + L+Q L+ ELRLPR L+A   G  LAVAGA +QVLL N LA+P V+G+SGGA+V  ++ 
Sbjct: 46  TELQQTLILELRLPRTLSAFATGGLLAVAGALMQVLLRNPLADPYVLGLSGGAAVGALLA 105

Query: 111 LLFFPSLNSPVAFMAAAVLGALLFTLLLVVMARKL-RLTTARLLLVGVALGILSGAVVTW 169
           +L   +  +      +A  GA+L TLL+  +A      T +RLLL GV +    GA++T 
Sbjct: 106 ML---AGAAGFLISGSAFAGAMLATLLVFGLAHGSGSWTPSRLLLTGVVVAAGWGAMITL 162

Query: 170 AFYFSDDLGLRQLMYWLMGSV--AGVSWYQHLLSLVAVPVVIWLVLQGGVLDKLMLGEGH 227
               +    L  ++YWLMG +  A   W   L+ LV V ++++ +  G  L+ L  G   
Sbjct: 163 ILSMTPASRLPGMLYWLMGDLSHAATPW-PGLIILVLVCLMVFPL--GRALNVLARGSLQ 219

Query: 228 AKQLGIDIHRVRWRLILAIALLVGASVALGGVIGFVGLVVPHLLRLTLGSENRLLLPLSA 287
           A  LG+ +  + W + L  +LL  A+V + G +GFVGLV+PH+LRL LG++ RL+LP  A
Sbjct: 220 AAALGVSVRPLEWSIYLMASLLTAAAVTMAGSVGFVGLVIPHMLRLVLGNDQRLILPACA 279

Query: 288 LCGALLLVSADLIARLALGSGELPLGVVTTTLGAPIFIWMLVRN 331
           L G  LLV AD +AR+ +   +LP+GV+T  +G P F+++L R+
Sbjct: 280 LAGGTLLVLADTLARVVIAPEQLPVGVITALIGVPTFLYLLYRS 323