Pairwise Alignments

Query, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., hemin ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  215 bits (548), Expect = 1e-60
 Identities = 119/278 (42%), Positives = 175/278 (62%), Gaps = 1/278 (0%)

Query: 54  EQQLVWELRLPRLLAAAVIGASLAVAGATLQVLLGNVLAEPGVVGVSGGASVAMVILLLF 113
           EQ +V  +RLPR L A  +GA LA  GA +Q L  N LA+PG++GVS GA++   I ++ 
Sbjct: 55  EQLVVSNVRLPRTLLALTVGAILAQCGAVMQGLFRNPLADPGIIGVSSGAALGAAICIVL 114

Query: 114 FPSLNSPVAFMAAAVLGALLFTLLLVVMARKLRLTTARLLLVGVALGILSGAVVTWAFYF 173
           FP + S +  + A + G     ++  + +  L  +   LLL GVA+  L+GA +    Y 
Sbjct: 115 FPDVGSLMISLGAFLCGLATTLIVYRLASNGLGTSVVLLLLSGVAIAALAGAGIGVLTYL 174

Query: 174 SDDLGLRQLMYWLMGSVAGVSWYQHLLSLVAVPVVIWLVLQGGV-LDKLMLGEGHAKQLG 232
           ++D+ LR L  W MGS+AG  W    L L+ + ++ W   +  + L+ L+LGE  A+ LG
Sbjct: 175 ANDMALRDLTLWQMGSIAGAQWQYVGLCLLVLVLLSWRFQRDAMALNALLLGEAEARHLG 234

Query: 233 IDIHRVRWRLILAIALLVGASVALGGVIGFVGLVVPHLLRLTLGSENRLLLPLSALCGAL 292
           I++ R++ RLIL  AL VG SVA  G+IGF+GLVVPHL+R+ LG +++ LLP+SAL GA 
Sbjct: 235 INVDRLKLRLILLCALGVGVSVAATGIIGFIGLVVPHLVRMILGPDHKRLLPMSALLGAA 294

Query: 293 LLVSADLIARLALGSGELPLGVVTTTLGAPIFIWMLVR 330
           LL  AD+ AR  L   ELP+ +VT  +GAP FI++L++
Sbjct: 295 LLALADIGARTFLPPAELPVSLVTALIGAPFFIFLLLQ 332