Pairwise Alignments

Query, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., transport system permease protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  185 bits (469), Expect = 2e-51
 Identities = 100/283 (35%), Positives = 163/283 (57%), Gaps = 2/283 (0%)

Query: 50  WSSLEQQLVWELRLPRLLAAAVIGASLAVAGATLQVLLGNVLAEPGVVGVSGGASVAMVI 109
           W++ +  +VWE+RLPR L AA++GA LA+ GA+LQ +  N LA+P ++G+S GA+   ++
Sbjct: 64  WTTGQAAIVWEIRLPRALLAAMVGAGLALVGASLQSVTRNPLADPHLLGISSGAAFGAIL 123

Query: 110 LLLFFPSLNSPVAFMAAAVLGALLFTLLLVVMARKLRLTTA-RLLLVGVALGILSGAVVT 168
            LL        +     A  GAL  TLL++ +    + T A RL+L GVA+  +  +   
Sbjct: 124 ALLHTGLFLGLLTVPLLAFAGALAATLLVLGVTSFAQATGADRLVLAGVAVSFIVMSCAN 183

Query: 169 WAFYFSDDLGLRQLMYWLMGSVAGVSWYQHLL-SLVAVPVVIWLVLQGGVLDKLMLGEGH 227
              +  D      +++W++G +    W Q L  +++ V   +W +     L+ + +G+  
Sbjct: 184 ILIFIGDPRATHTVVFWMLGGLGLAQWDQLLFPAVILVGCGLWFLANASRLNAMTIGDET 243

Query: 228 AKQLGIDIHRVRWRLILAIALLVGASVALGGVIGFVGLVVPHLLRLTLGSENRLLLPLSA 287
           A  LGI I R R  + +  ALL G  VA  G+IGFVGL++PH++R+ +G +   +LP SA
Sbjct: 244 ASTLGIPIARFRLSVFVVGALLTGCMVAFSGIIGFVGLMIPHIVRMLVGGDYARVLPASA 303

Query: 288 LCGALLLVSADLIARLALGSGELPLGVVTTTLGAPIFIWMLVR 330
           L GA+ LV AD+ AR  +   ++P+G+VT  +G   F+W+L R
Sbjct: 304 LVGAIFLVWADIAARTVMAPEDIPIGIVTGLIGGAFFVWLLRR 346