Pairwise Alignments

Query, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., Fe3+ ABC transporter, permease (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  144 bits (362), Expect = 4e-39
 Identities = 87/290 (30%), Positives = 163/290 (56%), Gaps = 18/290 (6%)

Query: 53  LEQQLVWELRLPRLLAAAVIGASLAVAGATLQVLLGNVLAEPGVVGVSGGASVAMVILLL 112
           + + ++  +R  R++ A +IG +L+V+G  +Q +  N LA+P ++GVS GA + + + +L
Sbjct: 25  MTRNILLSIRFIRVVVAGLIGIALSVSGLQMQTVFQNPLADPYLLGVSSGAGLGVALFIL 84

Query: 113 FFPSLN-------SPVAFMAAAVLGALLFTLLLVVMARKLRLTTARLLLVGVALGILSGA 165
             P L             + +  +G  +  L + +++RK++     +L++GV +G ++GA
Sbjct: 85  GAPLLGWADFPLLQSAGIVGSGWIGTAVILLGVAIISRKVK-NILGVLIMGVMIGYVAGA 143

Query: 166 VVTWAFYFSDDLGLRQLMYWLMGSVAGVSWYQHLLSLVAVPVVIWLVLQGGV---LDKLM 222
           ++    Y S    L+    W MGS++ ++  Q  LS++   V I L+L       L+ L+
Sbjct: 144 IIQILQYLSSAEQLKMFTLWSMGSLSHITAGQ--LSIMIPVVCIGLLLSVACIKSLNLLL 201

Query: 223 LGEGHAKQLGIDIHRVRWRLILAIALLVGASVALGGVIGFVGLVVPHLLRLTL-GSENRL 281
           LGE +A+ +G+ I R R  + ++ ALL G   A  G +GF+GL VPH+ RL    +++R+
Sbjct: 202 LGENYARTMGMSIKRSRTLVFISTALLTGTVTAFCGPVGFIGLAVPHITRLLFDNADHRI 261

Query: 282 LLPLSALCGALLLVSADLIARLALGSGELPLGVVTTTLGAPIFIWMLVRN 331
           L+P + L G + ++  D+IA+  L    LP+  +T  LG P+ +W++ +N
Sbjct: 262 LMPGTMLTGLIAMLICDIIAKKFL----LPVNCITALLGVPVILWVIGKN 307