Pairwise Alignments

Query, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., Vitamin B12 transporter, permease component (fecCD-like) (from data) from Shewanella sp. ANA-3

 Score =  155 bits (391), Expect = 2e-42
 Identities = 103/328 (31%), Positives = 176/328 (53%), Gaps = 28/328 (8%)

Query: 29  FLSVCVLYL-LVGELWLSPFSAWSSLEQQLVWELRLPRLLAAAVIGASLAVAGATLQVLL 87
           FL V  +++  +  L+++  +  +S+ +++V ELRLPR++ A V GA L++AG+ LQ + 
Sbjct: 51  FLDVLQVFINKLSHLFMADEAVSTSMTERIVMELRLPRIILAFVAGAGLSLAGSVLQTVT 110

Query: 88  GNVLAEPGVVGVSGGASVAMVILLLFFPS----------LNSPVAFMAAAVLGALLFTL- 136
            N LA+P + G+S GAS   V++L  F             NS +   +    G L F+L 
Sbjct: 111 RNPLADPYLFGISSGASFGAVVMLTLFTGSGLFGNAGTIANSGIFSGSGTFAGLLWFSLP 170

Query: 137 ----------LLVVMARK---LRLTTARLLLVGVALGILSGAVVTWAFYFSDDLGLRQLM 183
                     +L+V+A     L+    R+LL GVA   +  A+ +   YF+       ++
Sbjct: 171 FGAFIGASLSVLIVLALAGLGLKSQVERMLLSGVATSFMFSALTSLLLYFASPQATASVL 230

Query: 184 YWLMGSVAGVSWYQHLLSLVAVPVVIWLVL-QGGVLDKLMLGEGHAKQLGIDIHRVRWRL 242
           +W +GS A  SW   +L  + V +  +++L     +  L  G+  A  LG+++ ++R  +
Sbjct: 231 FWSLGSFAKASWSLLVLPSLVVLLSFFIILGWKRQIMALQAGDETAHTLGVNVPKLRLNM 290

Query: 243 ILAIALLVGASVALGGVIGFVGLVVPHLLRLTLGSENRLLLPLSALCGALLLVSADLIAR 302
           +L  +L+    VA  G IGFVGL++PH +RL       +L  L+AL G L +V  D++AR
Sbjct: 291 LLLCSLITAILVATCGGIGFVGLMIPHTVRLLFPGRQPIL--LTALVGGLFMVWIDVLAR 348

Query: 303 LALGSGELPLGVVTTTLGAPIFIWMLVR 330
             LG+ ELP+G++T  +G+  F+ +L R
Sbjct: 349 CLLGNQELPVGIITAAIGSFFFLLILRR 376