Pairwise Alignments

Query, 335 a.a., vitamin B12 ABC transporter permease BtuC from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., transport system permease protein (RefSeq) from Shewanella sp. ANA-3

 Score =  215 bits (548), Expect = 1e-60
 Identities = 121/278 (43%), Positives = 174/278 (62%), Gaps = 1/278 (0%)

Query: 54  EQQLVWELRLPRLLAAAVIGASLAVAGATLQVLLGNVLAEPGVVGVSGGASVAMVILLLF 113
           EQ +V  +RLPR L A  +GA LA  GA +Q L  N LA+PG++GVS GA++   I ++ 
Sbjct: 55  EQLVVSNVRLPRTLLALAVGAMLAQCGAVMQGLFRNPLADPGIIGVSSGAALGAAICIVQ 114

Query: 114 FPSLNSPVAFMAAAVLGALLFTLLLVVMARKLRLTTARLLLVGVALGILSGAVVTWAFYF 173
           FP   S +  ++A   G +   ++  + +  L  +   LLL GVA+  L+GA +    Y 
Sbjct: 115 FPHAESVMISVSAFSSGLITTLIVYRLASSALGTSVVLLLLSGVAVAALAGAGIGVLTYL 174

Query: 174 SDDLGLRQLMYWLMGSVAGVSWYQHLLSLVAVPVVIWLVLQGG-VLDKLMLGEGHAKQLG 232
           ++D+ LR L  W MGS+AG  W    L LV + ++ W   +    L+ L+LGE  A+ LG
Sbjct: 175 ANDMALRDLTLWQMGSIAGAQWQYVGLCLVVLALLSWQFNRDAKALNALLLGEAEARHLG 234

Query: 233 IDIHRVRWRLILAIALLVGASVALGGVIGFVGLVVPHLLRLTLGSENRLLLPLSALCGAL 292
           ID+  ++ RLIL  AL VG SVA  G+IGF+GLVVPHL+R+ LG +++ LLP+SAL GA 
Sbjct: 235 IDVDSLKLRLILLCALGVGVSVAATGIIGFIGLVVPHLVRMLLGPDHQRLLPMSALLGAA 294

Query: 293 LLVSADLIARLALGSGELPLGVVTTTLGAPIFIWMLVR 330
           LL  AD+ AR  L   ELP+G+VT  +GAP FI++L++
Sbjct: 295 LLALADIGARAFLPPAELPVGLVTALIGAPFFIFLLLQ 332