Pairwise Alignments

Query, 471 a.a., L-cystine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., symporter for L-glutamate, L-glutamine, and L-proline (from data) from Pseudomonas stutzeri RCH2

 Score =  188 bits (477), Expect = 3e-52
 Identities = 133/421 (31%), Positives = 214/421 (50%), Gaps = 36/421 (8%)

Query: 43  LSRQVLFGLVLGSAFGLALQVVLGEGHPAIQETLSWVAIVGNGYVGLLKMVIMPLVLVSM 102
           L +Q+L GL LG A G+A                  +A +G  ++  +KM+I+PLV VS+
Sbjct: 19  LWQQILIGLALGVAAGMAFGA-----------DAQLLAPIGTLFLNAIKMLIVPLVFVSL 67

Query: 103 ISAVVRLDKNGSLGKISSLTIGILLVTTAISALIGILITQAFGLTAEGL--VEGARETAR 160
           ++ +  +  +  LG+IS  TI I LVTTA +  IG+L    F    EG+  V    E A+
Sbjct: 68  VAGITSMQDSAKLGRISLKTIAIYLVTTAFAVSIGLLFGALFS-PGEGMNMVASGNEQAK 126

Query: 161 IAALESRASTVADLTIPQILLSFIPTNPFADLTGARSTSIIAVVIFGVLTGIAARKVIAD 220
            A            ++  IL+  +P NP   +T     +I+ +++F +  G++   +   
Sbjct: 127 QAP-----------SLVSILVGLVPANP---VTAFAEGNILQIIVFAIALGVSINLI--- 169

Query: 221 KQELETPIRTFVEAAQAIVMRLVKMIMALTPYGIAALMAKVVATSSATDILNLLGFIVAS 280
             E   P     +A      +L  ++M + P G+ AL A VV +  A  +L L G I   
Sbjct: 170 -GERGAPAVRLFDALAETFYKLTDLVMRVAPIGVFALTAGVVGSHGAEVLLPLAGVIGVI 228

Query: 281 YVA-IALMFVVHGLLVAMVG-VNPTRYFKNIWPVLTFAFTSRSSAATIPLNVEAQITKLN 338
           Y+A IA + +V+G L+ ++  +NP R+F+ I P L  AF++ SS+ T+P+++E     L 
Sbjct: 229 YLASIAHVLLVYGGLLGLLARLNPLRFFQGIAPALAVAFSTSSSSGTLPVSIECARKNLG 288

Query: 339 VPPAIANLSASFGATIGQNGCAGIYPAMLAVMVAPTVGINPLDIHFIVSLIAMITISSFG 398
           V   +A      GATI  +G A IY  +LA+ +A   GI+ L       +I   T++S G
Sbjct: 289 VSEGVAGFVLPVGATINMDGTA-IYQGVLALFIAQAFGID-LSAGQYAMIILTATLASIG 346

Query: 399 IAGVGGGATFAALIVLPAMGLPVTIAALLISIEPLIDMARTALNVSGSMTAGTVTSRLLK 458
            AG+ G       +VL A GLP+   AL+  I+ ++DMART +NV+G +   T+  R  +
Sbjct: 347 TAGIPGAGLIMLGLVLTAAGLPLEGVALIAGIDRILDMARTTVNVAGDLMTTTLVGRSEQ 406

Query: 459 E 459
           E
Sbjct: 407 E 407