Pairwise Alignments

Query, 471 a.a., L-cystine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., Na+/H+-dicarboxylate symporters from Pseudomonas stutzeri RCH2

 Score =  162 bits (411), Expect = 1e-44
 Identities = 130/425 (30%), Positives = 205/425 (48%), Gaps = 34/425 (8%)

Query: 42  TLSRQVLFGLVLGSAFGLALQVVLGEGHPAIQETLSWVAIVGNGYVGLLKMVIMPLVLVS 101
           +L+ Q+L    LG A G  L   L    P  +  L    + G+ ++GLLKMV++PL+  S
Sbjct: 3   SLNLQILIAACLGVAIGW-LTGTLPTDAPVREGVLYASTLAGSIFIGLLKMVLIPLIFTS 61

Query: 102 MISAVVRLDKNGSLGKISSLTIGILLVTTAISALIGILITQAF----GLTAEGLVEGARE 157
           ++  V  L  +  + ++    +    +TT+ + L+ ++    F    GL+ +   E   +
Sbjct: 62  IVVGVANLQAHHQVHRVWGGALVYFTLTTSAAMLVALVAANLFKPGAGLSLDLFAEAMND 121

Query: 158 TARIAALESRASTVADLTIPQILLSFIPT---NPFADLTGARSTSIIAVVIFGVLTGIAA 214
                  E+R      LT+P+  L F      NPFA L      SI+AVV+F +  GIA 
Sbjct: 122 ------FEAR-----QLTLPEFFLHFFANLFQNPFAALANG---SILAVVVFAMFIGIAL 167

Query: 215 RKVIADKQELETPIRTFVEAAQAIVMRLVKMIMALTPYGIAALMAKVVATSSATDILNLL 274
                  + +   ++ F+E    ++MR++  IM L P GI AL+ K+VA      +L+ +
Sbjct: 168 VAGGDRYRNILVVLQEFLE----LMMRIISWIMRLAPLGILALLIKLVAEQDVA-LLSAV 222

Query: 275 GFIVASYVAIALMF---VVHGLLVAMVGVNPTRYFKNIWPVLTFAFTSRSSAATIPLNVE 331
           G  +A   A  L     V+ G+L    G +P  +F+     L  AF + SSAAT+P+++ 
Sbjct: 223 GGFIALVFATTLFHGTVVLPGILFLATGKSPLWFFRGTREALITAFATSSSAATLPISLR 282

Query: 332 AQITKLNVPPAIANLSASFGATIGQNGCAGIYPAMLAVMVAPTVGIN-PLDIHFIVSLIA 390
                L V P IA      GAT+  +G A +Y A  A+ VA  +GI   L    +V   A
Sbjct: 283 CAEDNLKVRPGIAGFVLPLGATMNMDGTA-LYEAAAALFVANLMGIELSLAQQAVVFFTA 341

Query: 391 MITISSFGIAGVGGGATFAALIVLPAMGLPVTIAALLISIEPLIDMARTALNVSGSMTAG 450
           MI  +S G  G+        ++VL A+GLP    A+L+ I+ L+D  RTA+NV G +   
Sbjct: 342 MI--ASTGAPGIPSAGMVTMVMVLQAVGLPAEAVAILLPIDRLLDTVRTAVNVEGDIIGS 399

Query: 451 TVTSR 455
            V  R
Sbjct: 400 VVVQR 404