Pairwise Alignments

Query, 471 a.a., L-cystine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 430 a.a., proton/glutamate symporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  178 bits (451), Expect = 4e-49
 Identities = 131/418 (31%), Positives = 215/418 (51%), Gaps = 31/418 (7%)

Query: 40  AATLSRQVLFGLVLGSAFGLALQVVLGEGHPAIQETLSWVAIVGNGYVGLLKMVIMPLVL 99
           A  L  Q+L G++LG   GL    VLG    A++        +G  +V  +KM+I+PLV 
Sbjct: 15  AVPLWLQILTGMLLGIGVGL----VLGPDASALKP-------IGTLFVNTIKMLIVPLVF 63

Query: 100 VSMISAVVRLDKNGSLGKISSLTIGILLVTTAISALIGILITQAFGLTAEGLVEGARETA 159
            S+I  V  +     +G+I   +    L TTAI+  +G+++       A   +EG   +A
Sbjct: 64  CSLIVGVTSMQDTARMGRIGFKSFAFYLATTAIAISVGLMVGWLLEPGAGLSLEGHDLSA 123

Query: 160 RIAALESRASTVADLTIPQILLSFIPTNPFADLTGARSTSIIAVVIFGVLTGIAARKVIA 219
            +    S   T         L++ +PTNP A L    S  I+ V++F V  G+A   +I 
Sbjct: 124 EVKTAPSVMDT---------LINIVPTNPVAALA---SGQILQVIVFAVALGVAL-VLIG 170

Query: 220 DKQELETPIRTFVEAAQAIVMRLVKMIMALTPYGIAALMAKVVATSSATDILNLLGFIVA 279
           D  +    I+ F   A+A+  +L  M+M L PYG+  LMA V        +L L+  I+A
Sbjct: 171 DHGK--PAIKVFESLAEAMY-KLTDMVMKLAPYGVFGLMAWVAGEYGIDMLLPLIKVIIA 227

Query: 280 SYVAIALMFV-VHGLLVAMV-GVNPTRYFKNIWPVLTFAFTSRSSAATIPLNVEAQITKL 337
            Y+  AL  +  + L++ +V G++P ++FK I   +  AFT+ SSA T+P +++     L
Sbjct: 228 VYLGCALHILGFYSLVLKLVAGLSPIQFFKGISNAMAVAFTTSSSAGTLPASMKCASEYL 287

Query: 338 NVPPAIANLSASFGATIGQNGCAGIYPAMLAVMVAPTVGINPLDIHFIVSLIAMITISSF 397
            V   I++     G TI  +G A +Y  + A+ VA   G++   + ++ +++   T++S 
Sbjct: 288 GVNKKISSFVLPLGTTINMDGTA-LYQGVTALFVAQAFGVDLTWVDYL-TIVLTATLASI 345

Query: 398 GIAGVGGGATFAALIVLPAMGLPVTIAALLISIEPLIDMARTALNVSGSMTAGTVTSR 455
           G AGV G       +VL  +GLP+   A++  I+ ++DMART +NVSG + A TV +R
Sbjct: 346 GTAGVPGAGLVMLTLVLTTVGLPLEGVAIIAGIDRILDMARTVVNVSGDLVATTVIAR 403