Pairwise Alignments

Query, 471 a.a., L-cystine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  139 bits (350), Expect = 2e-37
 Identities = 110/416 (26%), Positives = 196/416 (47%), Gaps = 19/416 (4%)

Query: 42  TLSRQVLFGLVLGSAFGLALQVVLGEGHPAIQETLSWVAIVGNGYVGLLKMVIMPLVLVS 101
           +LS ++  GL +G   G  +Q VL + +      +   + +G  +V ++ M+++PLV VS
Sbjct: 4   SLSARIFLGLAIGLLSGTLVQYVLHDINFFSGTLVEIASGLGTMFVNMIMMLVVPLVFVS 63

Query: 102 MISAVVRLDKNGSLGKISSLTIGILLVTTAISALIGILITQAFGLTAEGLVEGARETARI 161
           ++  V  L    S G++   T G  ++ T ++            LT   L+E  +     
Sbjct: 64  IVCGVCELKDLSSFGRLGGKTFGFYIINTLVAIFAA--------LTVALLLEPGKGVDMT 115

Query: 162 AALESRASTVADLTIPQILLSFIPTNPFADLTGARSTSIIAVVIFGVLTGIAARKVIADK 221
              E   +     ++  +++  +P NP A      S +++ V+   +L G     VI   
Sbjct: 116 GGGELAITATELPSLMALVVDIVPRNPVAAFM---SGNMLQVIFMALLLG----GVIKSL 168

Query: 222 QELETPIRTFVEAAQAIVMRLVKMIMALTPYGIAALMAKVVATSSATDILNLLGFIVASY 281
            E  T   +  + A  I+M+L+ ++M L P G+ ALM K+ AT  A   L+++ ++V   
Sbjct: 169 GEHVTGAVSAFQTANKIMMKLISVVMHLAPIGVGALMFKLGATLEAGVFLSVMEYLVLIL 228

Query: 282 VAIAL-MFVVHGLLVAM-VGVNPTRYFKNIWPVLTFAFTSRSSAATIPLNVEAQITKLNV 339
             + L +FVV+   V +   V  + + +     + F+ ++ SS ATIP+ +     KL V
Sbjct: 229 GLLLLWIFVVYPYAVQLFTPVKASVFREKTQEQILFSLSTASSNATIPVTMRTLTEKLKV 288

Query: 340 PPAIANLSASFGATIGQNGCAGIYPAMLAVMVAPTVGINPLDIHFIVSLIAMITISSFGI 399
             A+A      GAT+   G + IY  +    +A   G+ P+ +  + +LI  I + S G 
Sbjct: 289 NRAVAGFGVPLGATMNMGGVS-IYITVAIFFIANAFGM-PITMEQLPALIFSIFLLSVGA 346

Query: 400 AGVGGGATFAALIVLPAMGLPVTIAALLISIEPLIDMARTALNVSGSMTAGTVTSR 455
            GV GG      +++  MGLPV   AL+ +++ LIDM  T+ NV G     T+  +
Sbjct: 347 GGVPGGGMVMIGVLIHQMGLPVEAFALVAALDRLIDMVLTSCNVVGDTAVLTIVDQ 402