Pairwise Alignments

Query, 471 a.a., L-cystine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., Sodium:dicarboxylate symporter (NCBI) from Rhodospirillum rubrum S1H

 Score =  106 bits (264), Expect = 2e-27
 Identities = 98/414 (23%), Positives = 188/414 (45%), Gaps = 29/414 (7%)

Query: 46  QVLFGLVLGSAFGLALQVVLGEGHPAIQETLSWVAIVGNGYVGLLKMVIMPLVLVSMISA 105
           QVL  +V G        V+LG  +P +   L     +G+ ++ L+KM+I P++ +++++ 
Sbjct: 23  QVLVAIVAG--------VLLGHFYPDLGSALK---PLGDAFIKLVKMIIAPVIFLTVVTG 71

Query: 106 VVRLDKNGSLGKISSLTIGILLVTTAISALIGILITQAFGLTAEGLVEGARETARIAALE 165
           +  L     +G+++   +   L  + ++ +IG+++       +   ++ A   A+  A++
Sbjct: 72  IAGLTDMQKVGRVAGKAMIYFLSFSTLALIIGMIVANVVHPGSGLNIDPASLDAK--AVQ 129

Query: 166 SRASTVADLTIPQILLSFIPTNPFADLTGARSTSIIAVVIFGVLTGIAARKVIADKQELE 225
           +  S   D ++   L++ IP+ P   ++   S  I+ V+ F VL GIA    +A   E  
Sbjct: 130 TYTSHAHDQSLVGFLMNIIPSTP---ISAFASGDILQVLFFAVLFGIA----LATVGERG 182

Query: 226 TPIRTFVEAAQAIVMRLVKMIMALTPYGIAALMAKVVATSSATDILNLLGFIVASYVAIA 285
            P+   +     +V RLV ++M   P G    MA  +       I NL   +   Y+   
Sbjct: 183 KPVLDLLNPLLQVVFRLVAIVMKAAPLGAFGAMAFTIGKYGIGSIANLAMLVGTFYLTSG 242

Query: 286 L-MFVVHGLLVAMVGVNPTRYFKNIWPVLTFAFTSRSSAATIPLNVEAQITKLNVPPAIA 344
           L +FVV GL+    G +     + I   L     + SS A +P  +E ++ +     ++ 
Sbjct: 243 LFVFVVLGLVARYNGFSLLALLRYIKEELLLVLGTSSSEAALPTLME-KLERAGCKKSVV 301

Query: 345 NLSASFGATIGQNGCAGIYPAMLAVMVAPTVGINPLDIHFIVSLIAMITISSFGIAGVGG 404
            L    G +   +G   IY  + A+ +A    I+ L +   + L+ +  +SS G AG+ G
Sbjct: 302 GLVVPTGYSFNLDG-TNIYMTLAALFIAQATNID-LSLQDQILLLLVAMLSSKGAAGITG 359

Query: 405 GATF---AALIVLPAMGLPVTIAALLISIEPLIDMARTALNVSGSMTAGTVTSR 455
                  A L V+P+  +PV   AL++ ++  +   R   N  G+  A  V ++
Sbjct: 360 AGFITLAATLSVVPS--VPVAGMALILGVDRFMSECRALTNFIGNAVATIVVAK 411