Pairwise Alignments

Query, 471 a.a., L-cystine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella loihica PV-4

 Score =  147 bits (372), Expect = 5e-40
 Identities = 119/418 (28%), Positives = 202/418 (48%), Gaps = 31/418 (7%)

Query: 46  QVLFGLVLGSAFGLALQVVLGEGHPAIQETLSWVAIVGNGYVGLLKMVIMPLVLVSMISA 105
           QV+  +++G+A G     ++GE         S  A +G  ++ L+KM+++PLVLVS+IS 
Sbjct: 15  QVVIAMIIGAAVGF----IMGE-------QASMFAPLGTLFIHLIKMLVIPLVLVSIISG 63

Query: 106 VVRLDKNGSLGKISSLTIGILLVTTAISALIGILITQAF--GLTAEGLVEGARETARIAA 163
              L  + S GKI   T G  ++T+ ++  + +L+   F  G   +     A    ++  
Sbjct: 64  AASLGDSPSAGKIGIGTFGFFIITSGVAVALALLLGSLFQPGNGVDFTAHSASGLMKVTE 123

Query: 164 LESRASTVADLTIPQILLSFIPTNPFADLTGARSTSIIAVVIFGVLTGIAARKVIADKQE 223
                  V D       +  IPTN F  LTG    +I+ +++F +  GIA  KV   K E
Sbjct: 124 EHGALPGVMD-----TFIGMIPTNVFESLTGG---NILQILVFSIFFGIALTKV---KGE 172

Query: 224 LETPIRTFVEAAQAIVMRLVKMIMALTPYGIAALMAKVVATSSATDILNLLGFIVASYVA 283
              PI   +       + ++  +M + P G+  LMA  V T    D L ++  + A +V 
Sbjct: 173 GSKPILAALNTIVDAFVWMINCVMVIAPIGVFGLMADSVGT-FGFDALEVVFKLFAVFVL 231

Query: 284 IALM--FVVHGLLVAMV-GVNPTRYFKNIWPVLTFAFTSRSSAATIPLNVEAQITKLNVP 340
             L+  F+   LLV +   V+  ++   +      A ++ SS AT+P+N+E    +L V 
Sbjct: 232 GILLFGFLFFPLLVQLFSNVSAKKFISVMKKPQVMALSTASSMATLPVNMETCEEELGVS 291

Query: 341 PAIANLSASFGATIGQNGCAGIYPAMLAVMVAPTVGINPLDIHFIVSLIAMITISSFGIA 400
              A+     GATI  +G A IY  ++A+  A   GI+ L +   +++I   T+ + G A
Sbjct: 292 KPTASFVLPLGATINMSGNA-IYYGLVAIFFAQMYGID-LSLGAYMAIIFTSTLGAIGQA 349

Query: 401 GVGGGATFAALIVLPAMGLPVTIAALLISIEPLIDMARTALNVSGSMTAGTVTSRLLK 458
           GV  G +F  + VL A G+P+    LL +++ + DM RT+LN++G      +  +  K
Sbjct: 350 GV-PGPSFLVVAVLLAAGIPIDGLPLLFALDRVFDMIRTSLNITGDAACAVILDKYTK 406