Pairwise Alignments

Query, 471 a.a., L-cystine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella loihica PV-4

 Score =  171 bits (433), Expect = 5e-47
 Identities = 127/425 (29%), Positives = 215/425 (50%), Gaps = 24/425 (5%)

Query: 35  GLQKKAATLSRQVLFGLVLGSAFGLALQVVLGEGHPAIQE--TLSWVAIVGNGYVGLLKM 92
           G Q K   L+ ++L G+  G   GL L+     G   I+E  T   + +VG+ ++  L+M
Sbjct: 3   GTQNKKLGLTGKILIGMAGGILTGLLLRSFF-PGSEFIEEYITNGLLNVVGSIFISSLQM 61

Query: 93  VIMPLVLVSMISAVVRLDKNGSLGKISSLTIGILLVTTAISALIGILITQAFGLTAEGLV 152
           +++PLV +S++     L    SLG++   TI   L TTAI+  + IL+     L   G  
Sbjct: 62  LVVPLVFISLVCGTCSLSDPSSLGRLGGKTIAFYLFTTAIALSMAILVAL---LVHPG-- 116

Query: 153 EGARETARIAALESRASTVADLTIPQILLSFIPTNPFADLTGARSTSIIAVVIFGVLTGI 212
                 A +AA   + S     ++  +L++ +P NP   +T     +++ ++IF V+ G 
Sbjct: 117 -----NASLAAENMQYSVKEAPSLSDVLINLVPRNPIQAMTEG---NMLQIIIFAVIFGF 168

Query: 213 AARKVIADKQELETPIRTFVEAAQAIVMRLVKMIMALTPYGIAALMAKVVATSSATDILN 272
           A    I+   E    +         ++MR+V +IM L PYGI ALM K+  T       +
Sbjct: 169 A----ISHIGERGKRVSALFNDLNEVIMRVVTLIMQLAPYGIFALMGKLALTLGLETFES 224

Query: 273 LLG-FIVASYVAIALMFVVHGLLVAMV-GVNPTRYFKNIWPVLTFAFTSRSSAATIPLNV 330
           ++  F+V   V +   FV + +L+ +  G++P  + + +  V  FAF++ SS AT+P+ +
Sbjct: 225 VVKYFMVVLAVLLVHAFVSYPVLLKLFSGLSPFTFIRKMRDVQLFAFSTASSNATLPVTL 284

Query: 331 EAQITKLNVPPAIANLSASFGATIGQNGCAGIYPAMLAVMVAPTVGINPLDIHFIVSLIA 390
           E    +L V   +A+ +   GATI  +G A I   +  V +A   GI+ L I     ++ 
Sbjct: 285 ETSEHRLGVDNKVASFTLPLGATINMDGTA-IMQGVATVFIAQVFGID-LTITDYAMVVV 342

Query: 391 MITISSFGIAGVGGGATFAALIVLPAMGLPVTIAALLISIEPLIDMARTALNVSGSMTAG 450
             T++S G AGV G       +VL  +GLPV   AL++ ++ L+DM RTA+NV+G   A 
Sbjct: 343 TATLASIGTAGVPGVGLIMLAMVLNQVGLPVEGIALIMGVDRLLDMVRTAVNVTGDSVAT 402

Query: 451 TVTSR 455
            + ++
Sbjct: 403 VIIAK 407