Pairwise Alignments

Query, 471 a.a., L-cystine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 416 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella loihica PV-4

 Score =  196 bits (498), Expect = 1e-54
 Identities = 132/424 (31%), Positives = 220/424 (51%), Gaps = 39/424 (9%)

Query: 45  RQVLFGLVLGSAFGLALQVVLGEGHPAIQETLSWVAIVGNGYVGLLKMVIMPLVLVSMIS 104
           ++VL G +LG   G    VVLGE    ++        +G+ ++  +KM++ PL+  +++ 
Sbjct: 12  QKVLAGFILGVGLG----VVLGEQATQLKP-------LGDLFIAAIKMLVAPLIFCAIVV 60

Query: 105 AVVRLDKNGSLGKISSLTIGILLVTTAISALIGILITQAFGLTAEGLVEGARETARIAAL 164
           ++  L  + SL ++S  T+ + ++T  I++LIG+ I     +                +L
Sbjct: 61  SITSLGNDVSLKRLSIKTLAMFMLTGTIASLIGLAIGSLIDMGG--------------SL 106

Query: 165 ESRASTVADLTIP---QILLSFIPTNPFADLTGARSTSIIAVVIFGVLTGIAARKVIADK 221
           E   + V +  +P   Q+LL  IP NPFA L   +   ++ +++F  L GIA  K I +K
Sbjct: 107 ELATTEVRERNVPGFAQVLLDMIPVNPFASLAEGK---VLQIIVFAALVGIAINK-IGEK 162

Query: 222 QELETPIRTFVEAAQAIVMRLVKMIMALTPYGIAALMAKVVATSSATDILNLLGFIVASY 281
            E   P++  +EA   ++ +L +M++ LTP G+  LMA VV     + +L L  FI A Y
Sbjct: 163 AE---PLKRTIEAGAEVMFQLTRMVLQLTPIGVFGLMAWVVGEYGLSTLLPLGKFIGAIY 219

Query: 282 VA--IALMFVVHGLLVAMVGVNPTRYFKNIWPVLTFAFTSRSSAATIPLNVEAQITKLNV 339
           +A  I ++FV  GL+    G++  ++F+   P    AFT+ SS  T+P +  A  T + V
Sbjct: 220 IAALIHMVFVYGGLVRFGAGLSAVQFFRKAMPAQLVAFTTASSFGTLPASTRATET-MGV 278

Query: 340 PPAIANLSASFGATIGQNGCAGIYPAMLAVMVAPTVGINPLDIHFIVSLIAMITISSFGI 399
                      GAT+  +GC GIYPA+ A+ +A   GI PL++   + +    T++S G 
Sbjct: 279 SKKYGAFVLPLGATMNMDGCGGIYPAIAAIFIAQIYGI-PLEMTDYMLIAVTATVASVGT 337

Query: 400 AGVGGGATFAALIVLPAMGLPVTIAALLISIEPLIDMARTALNVSGSMTAGTVTSRLLKE 459
           AGV G A     + L  +GLP+   A + SI+ +IDM RTA NV+G M    V  +   +
Sbjct: 338 AGVPGSAMVMLSVTLGVVGLPLEGIAFIASIDRVIDMIRTATNVTGDMMTAVVVGKSEGQ 397

Query: 460 TNEE 463
            ++E
Sbjct: 398 LDQE 401