Pairwise Alignments

Query, 471 a.a., L-cystine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., proton/glutamate symporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  145 bits (365), Expect = 3e-39
 Identities = 111/422 (26%), Positives = 202/422 (47%), Gaps = 25/422 (5%)

Query: 42  TLSRQVLFGLVLGSAFGLALQVVLGEGHPAIQETLSWVAIVGNGYVGLLKMVIMPLVLVS 101
           +LS ++  GL  G   G  +Q  L +        +   + VG  +V ++ M+++PLV VS
Sbjct: 4   SLSTRIFIGLFTGLILGTLVQYFLNDIGFFSGNLVELASGVGTMFVNMIMMLVVPLVFVS 63

Query: 102 MISAVVRLDKNGSLGKISSLTIGILLVTTAISALIGILITQAFGLTAEGLVEGARETARI 161
           ++  V  L    S G++   T G  +V T ++    +L+          L+    +   +
Sbjct: 64  IVCGVCELQDLKSFGRLGGKTFGFYIVNTVVAISTALLVV---------LLLDPGKGVDM 114

Query: 162 AALESRASTVADL-TIPQILLSFIPTNPFADLTGARSTSII--AVVIFGVLTGIAARKVI 218
           ++ +  A T  +L ++  +L+  +P NP A         +I  A+++ GV+  +      
Sbjct: 115 SSADGVAITATELPSLIALLIDIVPRNPVAAFMSGNMLQVIFMALMLGGVMKSLG----- 169

Query: 219 ADKQELETPIRTFVEAAQAIVMRLVKMIMALTPYGIAALMAKVVATSSATDILNLLGFIV 278
              + +   ++ F + A  I+M+L+ ++M+L P+G+ ALM K+ AT  A   +++L ++V
Sbjct: 170 ---EHVAGAVQGF-QTANKIMMKLISVVMSLAPFGVFALMFKLGATLDAAVFMSVLEYLV 225

Query: 279 ASYVAIAL-MFVVHGLLVAMVGVNPTRYFK-NIWPVLTFAFTSRSSAATIPLNVEAQITK 336
                + L +FVV+ L V M      + F+      + F+ ++ SS ATIP+ +     K
Sbjct: 226 IILALLLLWIFVVYPLSVGMFTPISAKTFRAKTQEQVLFSLSTASSNATIPVTMRTLTEK 285

Query: 337 LNVPPAIANLSASFGATIGQNGCAGIYPAMLAVMVAPTVGINPLDIHFIVSLIAMITISS 396
           L V  A+A      GAT+   G A IY  +    VA   G+ P+    + SL+  I + S
Sbjct: 286 LGVNRAVAGFGVPLGATMNMGGVA-IYITIAIFFVANAFGM-PITSEQLPSLLFSIFLLS 343

Query: 397 FGIAGVGGGATFAALIVLPAMGLPVTIAALLISIEPLIDMARTALNVSGSMTAGTVTSRL 456
            G  GV GG      +++  MGLP+   A++ +++ +IDM  T+ NV G     T+  + 
Sbjct: 344 VGAGGVPGGGMVMIGVLIHQMGLPIEAFAIVAALDRIIDMVLTSCNVVGDTAVLTIVDQT 403

Query: 457 LK 458
            K
Sbjct: 404 EK 405