Pairwise Alignments

Query, 471 a.a., L-cystine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., proton/glutamate symporter, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  204 bits (519), Expect = 5e-57
 Identities = 133/420 (31%), Positives = 218/420 (51%), Gaps = 32/420 (7%)

Query: 45  RQVLFGLVLGSAFGLALQVVLGEGHPAIQETLSWVAIVGNGYVGLLKMVIMPLVLVSMIS 104
           ++VL G +LG+  G    V+LGE    ++        +G+ ++  +KM++ PLV  S++ 
Sbjct: 13  QKVLTGFILGALVG----VLLGESATVLKP-------LGDLFISAIKMLVAPLVFCSIVV 61

Query: 105 AVVRLDKNGSLGKISSLTIGILLVTTAISALIGILITQAFGLTAEGLVEGARETARIAAL 164
           ++  L    +L ++S  T+G+ ++T  I++LIG+ +     +           T ++A  
Sbjct: 62  SITSLGSQTNLKRLSIKTLGMFMLTGTIASLIGLAVGSLIDMGG---------TMQLATT 112

Query: 165 ESRASTVADLTIPQILLSFIPTNPFADLTGARSTSIIAVVIFGVLTGIAARKVIADKQEL 224
           E R   +      Q+LL  IP NPFA L   +   ++ +++F  L GIA  KV  +K E 
Sbjct: 113 EVRERNIPGFA--QVLLDMIPINPFASLAEGK---VLQIIVFAALVGIAINKV-GEKAE- 165

Query: 225 ETPIRTFVEAAQAIVMRLVKMIMALTPYGIAALMAKVVATSSATDILNLLGFIVASYVAI 284
             P++  +EA   ++ +L +M++ LTP G+  LMA VV     + +L L  FI A Y+A 
Sbjct: 166 --PLKRTIEAGAEVMFQLTRMVLKLTPIGVFGLMAWVVGEYGLSTLLPLGKFIAAIYIAA 223

Query: 285 AL-MFVVHGLLVAMVGVNPTRYFKNIWPVLTFAFTSRSSAATIPLNVEAQITKLNVPPAI 343
            + M  V+G  V + G++P ++F+   P    AF++ SS  T+P +  A +  + V    
Sbjct: 224 LVHMIFVYGGFVKLAGLSPIQFFRKALPAQLVAFSTSSSFGTLPASTRA-VETMGVSKRY 282

Query: 344 ANLSASFGATIGQNGCAGIYPAMLAVMVAPTVGINPLDIHFIVSLIAMITISSFGIAGVG 403
           +      GAT+  +GC GIYPA+ A+ +A   GI PLD    V +    TI+S G AGV 
Sbjct: 283 SAFVMPLGATMNMDGCGGIYPAIAAIFIAQIYGI-PLDTLDYVMIAVTATIASVGTAGVP 341

Query: 404 GGATFAALIVLPAMGLPVTIAALLISIEPLIDMARTALNVSGSMTAGTVTSRLLKETNEE 463
           G A     + L  +GLP+   A + SI+ +IDM RT  NV+G M    V  +   E + E
Sbjct: 342 GSAMVMLTVTLGVIGLPLEGIAFIASIDRIIDMIRTTTNVTGDMMTAVVIGKSENELDVE 401