Pairwise Alignments

Query, 471 a.a., L-cystine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 412 a.a., proton/glutamate symporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  140 bits (353), Expect = 8e-38
 Identities = 116/425 (27%), Positives = 199/425 (46%), Gaps = 32/425 (7%)

Query: 46  QVLFGLVLGSAFGLALQVVLGEGHPAIQETLSWVAIVGNGYVGLLKMVIMPLVLVSMISA 105
           QV+  +++G+  G  +            E+ S  A +G  ++ L+KM+++PLVLVS+IS 
Sbjct: 13  QVVIAMIIGALVGFMMG-----------ESASIFAPLGTIFIHLIKMLVIPLVLVSIISG 61

Query: 106 VVRLDKNGSLGKISSLTIGILLVTTAISALIGILITQAF--GLTAEGLVEGARETARIAA 163
              L  + S GKI   T G  ++T+ ++  + +++   F  G   +     + +   +  
Sbjct: 62  AASLGDSPSAGKIGVGTFGFFIITSGLAVALALVMGSIFTPGAGVDFTAHSSSDLMEVTK 121

Query: 164 LESRASTVADLTIPQILLSFIPTNPFADLTGARSTSIIAVVIFGVLTGIAARKVIADKQE 223
                  V D       +  IPTN F  L G    +I+ +++F +  GIA  KV  D  +
Sbjct: 122 EHGALPGVID-----TFIGMIPTNVFESLNGG---NILQILVFSIFFGIALTKVKGDGAK 173

Query: 224 LETPIRTFVEAAQAIVMRLVKMIMALTPYGIAALMAKVVATSSATDILNLLGFIVASYVA 283
              PI   +       + ++  +M + P G+  LMA  V T    D L ++  + A +VA
Sbjct: 174 ---PIMAALNTVVDAFVWMINCVMVIAPIGVFGLMADSVGT-FGFDALEVVFKLFAVFVA 229

Query: 284 IALM--FVVHGLLVAMVG-VNPTRYFKNIWPVLTFAFTSRSSAATIPLNVEAQITKLNVP 340
             L+  FV   L+V +   V+  ++   +      A ++ SS AT+P+N+E     L V 
Sbjct: 230 AILIYGFVFFPLVVQLFSKVSARQFISAMKKPQVMALSTASSMATLPVNMETCEEDLKVS 289

Query: 341 PAIANLSASFGATIGQNGCAGIYPAMLAVMVAPTVGINPLDIHFIVSLIAMITISSFGIA 400
            A        GATI  +G A IY  ++A+  A    I+ L +    ++I   T+ + G A
Sbjct: 290 KATTAFVLPLGATINMSGNA-IYYGLVAMFFAQMYNID-LSMTAYAAIIFTSTLGAIGQA 347

Query: 401 GVGGGATFAALIVLPAMGLPVTIAALLISIEPLIDMARTALNVSGSMTAGTVTSRLLKE- 459
           GV  G +F  + VL A G+P+    LL +++ + DM RTALN++G      +  +   E 
Sbjct: 348 GV-PGPSFLVVAVLLAAGIPIDGLPLLFALDRVFDMIRTALNITGDAACAVIMDKYTAEQ 406

Query: 460 TNEEP 464
             +EP
Sbjct: 407 LTQEP 411