Pairwise Alignments

Query, 471 a.a., L-cystine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 417 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella sp. ANA-3

 Score =  204 bits (520), Expect = 3e-57
 Identities = 132/421 (31%), Positives = 221/421 (52%), Gaps = 33/421 (7%)

Query: 45  RQVLFGLVLGSAFGLALQVVLGEGHPAIQETLSWVAIVGNGYVGLLKMVIMPLVLVSMIS 104
           ++VL G +LG+  G    V+LGE       T + +  +G+ ++  +KM++ PLV  +++ 
Sbjct: 13  QKVLAGFILGALVG----VLLGE-------TATVLKPLGDLFISAIKMLVAPLVFCAIVV 61

Query: 105 AVVRLDKNGSLGKISSLTIGILLVTTAISALIGILITQAFGLTAEGLVEGARETARIAAL 164
           ++  L    +L ++S  T+G+ ++T  +++LIG+ +     +           T ++A  
Sbjct: 62  SITSLGSQTNLKRLSLKTLGMFMLTGTVASLIGLAVGSLIDMGG---------TMQLATT 112

Query: 165 ESRASTVADLTIPQILLSFIPTNPFADLTGARSTSIIAVVIFGVLTGIAARKVIADKQEL 224
           E R   +      Q+LL  IP NPFA L   +   ++ +++F  L GIA  KV  +K E 
Sbjct: 113 EVRERNIPGFA--QVLLDMIPVNPFASLADGK---VLQIIVFAALVGIAINKV-GEKAE- 165

Query: 225 ETPIRTFVEAAQAIVMRLVKMIMALTPYGIAALMAKVVATSSATDILNLLGFIVASYVA- 283
             P++  +EA   ++ +L +M++ LTP G+  LMA VV     + +L L  FI A Y+A 
Sbjct: 166 --PLKRTIEAGAEVMFQLTRMVLKLTPIGVFGLMAWVVGEYGLSTLLPLGKFIAAIYIAA 223

Query: 284 -IALMFVVHGLLVAMVGVNPTRYFKNIWPVLTFAFTSRSSAATIPLNVEAQITKLNVPPA 342
            I ++FV  GL+    G++P ++F+   P    AF++ SS  T+P +  A +  + V   
Sbjct: 224 LIHMIFVYGGLVKFAAGLSPVQFFRKAMPAQLVAFSTSSSFGTLPASTRA-VETMGVSKR 282

Query: 343 IANLSASFGATIGQNGCAGIYPAMLAVMVAPTVGINPLDIHFIVSLIAMITISSFGIAGV 402
            +      GAT+  +GC GIYPA+ A+ +A   GI PLD    V +    T++S G AGV
Sbjct: 283 YSAFVMPLGATMNMDGCGGIYPAIAAIFIAQIYGI-PLDTLDYVMIAVTATVASVGTAGV 341

Query: 403 GGGATFAALIVLPAMGLPVTIAALLISIEPLIDMARTALNVSGSMTAGTVTSRLLKETNE 462
            G A     + L  +GLP+   A + +I+ +IDM RTA NV+G M    V  +   E + 
Sbjct: 342 PGSAMVMLTVTLGVIGLPLEGIAFIAAIDRIIDMIRTATNVTGDMMTAVVIGKSENELDV 401

Query: 463 E 463
           E
Sbjct: 402 E 402