Pairwise Alignments

Query, 471 a.a., L-cystine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella sp. ANA-3

 Score =  189 bits (481), Expect = 1e-52
 Identities = 138/437 (31%), Positives = 223/437 (51%), Gaps = 23/437 (5%)

Query: 36  LQKKAATLSRQVLFGLVLGSAFGLALQVVLGEGHPAIQE-TLSWVAIVGNGYVGLLKMVI 94
           LQKK   L+ ++LFG+  G A GL L+ V  E        T  ++ ++G  ++  LKM++
Sbjct: 5   LQKKFG-LTSKILFGMATGIALGLILRNVFPESDIVKDYITEGFLHVIGTIFISSLKMLV 63

Query: 95  MPLVLVSMISAVVRLDKNGSLGKISSLTIGILLVTTAISALIGILITQAFGLTAEGLVEG 154
           +PLV +S++     L +   LG++   T+   L TTAI+ ++ I+      L   G    
Sbjct: 64  VPLVFISLVCGTCSLSEPSKLGRLGGKTLAFYLFTTAIALILAIVSAV---LVHPGNASL 120

Query: 155 ARETARIAALESRASTVADLTIPQILLSFIPTNPFADLTGARSTSIIAVVIFGVLTGIAA 214
           A E     A E+ +       +  +L++ +PTNP   ++     +++ ++IF V+ G A 
Sbjct: 121 ASEKMEYTAKEAPS-------LSSVLINIVPTNPMQAMSEG---NMLQIIIFAVIFGFA- 169

Query: 215 RKVIADKQELETPIRTFVEAAQAIVMRLVKMIMALTPYGIAALMAKVVATSSATDILNLL 274
              IA   E    +    E    ++MR+V +IM L PYG+ ALMAK+  T       +++
Sbjct: 170 ---IAHIGERGKRVAALFEDLNEVIMRVVTLIMQLAPYGVFALMAKLALTLGLGTFESVV 226

Query: 275 G-FIVASYVAIALMFVVHGLLVAMV-GVNPTRYFKNIWPVLTFAFTSRSSAATIPLNVEA 332
             F V   V +   F+V+  L+ +  G+NP  + + +  V  FAF++ SS AT+P+ +EA
Sbjct: 227 KYFFVVLVVLLIHAFIVYPTLLKLFSGLNPLIFIRKMRDVQLFAFSTASSNATLPITIEA 286

Query: 333 QITKLNVPPAIANLSASFGATIGQNGCAGIYPAMLAVMVAPTVGINPLDIHFIVSLIAMI 392
              +L V   IA+ +   GATI  +G A I   +  V +A   GI  L I    +++   
Sbjct: 287 SEHRLGVDNKIASFTLPLGATINMDGTA-IMQGVATVFIAQVFGIE-LTITDYAAVVVTA 344

Query: 393 TISSFGIAGVGGGATFAALIVLPAMGLPVTIAALLISIEPLIDMARTALNVSGSMTAGTV 452
           T++S G AGV G       +VL  +GLPV   AL+I ++ L+DM RTA+NV+G   A  V
Sbjct: 345 TLASIGTAGVPGVGLIMLAMVLNQVGLPVEGIALIIGVDRLLDMVRTAVNVTGDCVATVV 404

Query: 453 TSRLLKETNEEPEPQTQ 469
            ++   E NE     TQ
Sbjct: 405 IAKSEGEFNETVFNNTQ 421