Pairwise Alignments

Query, 471 a.a., L-cystine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella sp. ANA-3

 Score =  120 bits (300), Expect = 1e-31
 Identities = 96/381 (25%), Positives = 181/381 (47%), Gaps = 31/381 (8%)

Query: 82  VGNGYVGLLKMVIMPLVLVSMISAVVRLDKNGSLGKISSLTIGILLVTTAISALIGILIT 141
           +G  ++ LL M+I+PLV +S+ S++ R+     LG I +  +G+ ++   I A +GI + 
Sbjct: 52  LGQIFLNLLFMIIVPLVAISVTSSIARMTDLKKLGAILASIMGVSILMAIIPA-VGITLL 110

Query: 142 QAFGLTAEGLVEGARETARIAALESRASTVADLTIPQILLSFIPTNPFADLTGARSTSII 201
                 A+G+     +T            V+D +     ++ + TN F+ L     ++I+
Sbjct: 111 ALVFDPAQGVTLDLNQT------------VSDTSGKMDFVALLTTNDFSGLLS--KSNIL 156

Query: 202 AVVIFGVLTGIAARKVIADKQELETPIRTFVEAAQAIVMRLVKMIMALTPYGIAALMAKV 261
           A++I  V+ GIA    I    E    +   +++   ++M++V +IM   P G+ A  A  
Sbjct: 157 ALIIMSVIAGIA----IGQSGEDGRKVSALLDSFNTVIMKIVSIIMLAAPVGLGAYFAST 212

Query: 262 VATSSATDILNLLGFIVASYVAIALMFVVHGLLVAMVGVNPTRYFKNIW-----PVLTFA 316
           +A+     ++     +    VA  +   V     A +G       +  W     P +T A
Sbjct: 213 MASQDPQLVVTFARAVGLFLVACFIYLTVGSTFYAWLG-GGMHGIRQFWRHALEPAVT-A 270

Query: 317 FTSRSSAATIPLNVEAQITKLNVPPAIANLSASFGATIGQNGCAGIYPAMLAVMVAPTVG 376
             + SS AT+P+ + A + K+ + P IA++S      + + G A I  A+  V +   +G
Sbjct: 271 LGTTSSLATLPVTLRAAL-KMGIKPEIADISLPLLVNLNKGG-ASIITALKIVFIYSLLG 328

Query: 377 IN-PLDIHFIVSLIAMITISSFGIAGVGGGATFAALIVLPAMGLPVTIAALLISIEPLID 435
           ++  +D+  +  LI+++  S+F I GV GGA    + ++ A+GLP+    +L+ I  + D
Sbjct: 329 LDFTVDVFMVTILISVL--SAFIIGGVPGGAFLGEIFIVTALGLPMETIPILVVIGAITD 386

Query: 436 MARTALNVSGSMTAGTVTSRL 456
              T +NV   + A  +  RL
Sbjct: 387 APSTVINVVHDLNASQIVERL 407