Pairwise Alignments

Query, 471 a.a., L-cystine transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., sodium:dicarboxylate symporter (RefSeq) from Shewanella sp. ANA-3

 Score =  143 bits (361), Expect = 9e-39
 Identities = 120/419 (28%), Positives = 201/419 (47%), Gaps = 31/419 (7%)

Query: 46  QVLFGLVLGSAFGLALQVVLGEGHPAIQETLSWVAIVGNGYVGLLKMVIMPLVLVSMISA 105
           QV+  +++G+  G  +            E+ S  A +G  ++ L+KM+++PLVLVS+IS 
Sbjct: 13  QVVIAMIIGALVGFTMG-----------ESASIFAPLGTIFIHLVKMLVIPLVLVSIISG 61

Query: 106 VVRLDKNGSLGKISSLTIGILLVTTAISALIGILITQAFGLTAEGLVEGARETARIAA-- 163
              L  + S GKI   T G  +VT+ I+  + +++   F   A     G   TA  ++  
Sbjct: 62  AASLGDSPSAGKIGVGTFGFFIVTSGIAVALALVMGNMFTPGA-----GVDFTAHSSSGL 116

Query: 164 LESRASTVADLTIPQILLSFIPTNPFADLTGARSTSIIAVVIFGVLTGIAARKVIADKQE 223
           +E  A   A   +    +  IPTN F  LTG    +I+ +++F +  GIA  KV  D  +
Sbjct: 117 MEVTAEHGALPGVMDTFIGMIPTNVFESLTGG---NILQILVFSIFFGIALTKVKGDGAK 173

Query: 224 LETPIRTFVEAAQAIVMRLVKMIMALTPYGIAALMAKVVATSSATDILNLLGFIVASYVA 283
              PI   +       + ++  +M + P G+  LMA  V T    D L ++  + A +VA
Sbjct: 174 ---PIMAALNTVVDAFVWMINCVMVIAPIGVFGLMADSVGT-FGFDALEVVFKLFAVFVA 229

Query: 284 IALM--FVVHGLLVAMVG-VNPTRYFKNIWPVLTFAFTSRSSAATIPLNVEAQITKLNVP 340
             L+  FV   L+V +   V+  ++   +      A ++ SS AT+P+N+E     L V 
Sbjct: 230 AILIYGFVFFPLVVQLFSRVSARQFISAMKKPQVMALSTASSMATLPVNMETCEEDLKVS 289

Query: 341 PAIANLSASFGATIGQNGCAGIYPAMLAVMVAPTVGINPLDIHFIVSLIAMITISSFGIA 400
            A        GATI  +G A IY  ++A+  A    ++ L +    ++I   T+ + G A
Sbjct: 290 KATTAFVLPLGATINMSGNA-IYYGLVAMFFAQMYNVD-LSMTAYAAIIFTSTLGAIGQA 347

Query: 401 GVGGGATFAALIVLPAMGLPVTIAALLISIEPLIDMARTALNVSGSMTAGTVTSRLLKE 459
           GV  G +F  + VL A G+P+    LL +++ + DM RTALN++G      +  +   E
Sbjct: 348 GV-PGPSFLVVAVLLAAGIPIDGLPLLFALDRVFDMIRTALNITGDAACAVIMDKYTAE 405