Pairwise Alignments

Query, 474 a.a., exodeoxyribonuclease I from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., Exodeoxyribonuclease I subunit C from Pseudomonas syringae pv. syringae B728a

 Score =  429 bits (1103), Expect = e-124
 Identities = 216/476 (45%), Positives = 303/476 (63%), Gaps = 18/476 (3%)

Query: 8   TFFFFDYETWGVNPAKDRPSQFAGVRTDMDFNIIGEPLVIYCQLPNDYLPAPEAALITGI 67
           + F++DYET G+NP  DR  Q AG+RTD + N I  P+ ++CQL +D LP P A +ITGI
Sbjct: 4   SIFWYDYETTGINPRNDRALQMAGIRTDTELNEIAPPVNLHCQLSDDILPHPAACMITGI 63

Query: 68  TPQKANSQGLAEPEFIARIHAELSTPNTINLGYNSIRFDDEVTRYTCYRNFIDPYAWSWQ 127
           TP     +GL E +F+ R+HAELS P T   GYN++RFDDEVTRY+ YRNF DPYA  WQ
Sbjct: 64  TPATLAEKGLCEADFMTRVHAELSAPGTCGAGYNTLRFDDEVTRYSFYRNFFDPYAREWQ 123

Query: 128 HGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIEHSNAHDAMADVIA 187
            GNSRWDL+DV+RA +ALRP+GI WPE  DG  + KLE L+ ANGI+H  AHDA++DV A
Sbjct: 124 GGNSRWDLIDVVRAAYALRPDGIVWPE-QDGRVTLKLERLTAANGIDHGQAHDALSDVRA 182

Query: 188 TIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGMLGRERHYTSWIVPI 247
           TI LA+ ++  QPKL+DY F +R K+K+ E + ++   PL+H+SG     R+Y   ++P+
Sbjct: 183 TIALARLIREKQPKLYDYLFALRSKQKVQEQVRLMQ--PLVHISGRFSAARNYLGVVLPL 240

Query: 248 AWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELPVPVKLVHLNKCPI 307
           AWHP N+NA+IV DL  D  PLL  DAE L+ RLYTR++ L+  ELPVP+KL+H+N+CP+
Sbjct: 241 AWHPHNRNALIVCDLHLDHAPLLHEDAEILKRRLYTRHDALSDGELPVPLKLLHINRCPV 300

Query: 308 LAPAKTLTAENAQKIGIDREQCLAHLNVIRQHPEI-REKLVTVFSQEREFNQESDVDSQL 366
           +AP   L +E+ Q++ +D     A    + ++ E+   KL  ++ ++ +F    D + QL
Sbjct: 301 IAPLGVLRSEDQQRLQLDMAGYQARATQLSENREVWHGKLAAIYGKD-DFAASEDPEQQL 359

Query: 367 YAGFFSPADRAAMEIIRTTAPENLGSLAIRVADKRIEPLLFRYRARHYPHTLTDTEQRRW 426
           Y GF    DR   E +R   PE L   A    D R+  LLFRYRAR++P TL+  EQ RW
Sbjct: 360 YDGFIGDRDRRLCEQVRQAEPEQLARDAWPFDDARLPELLFRYRARNFPDTLSGEEQTRW 419

Query: 427 AAHCRDYFERNLEGYMLNLENLVHEH---------QADPKKMAILKSVYHYVEKLA 473
               RD+ ++ L        N +H+           A P+++ +L+    Y  +L+
Sbjct: 420 ----RDFCQQRLRNPEWGAPNTLHDFTAAWVECSLSAGPEQLEVLRQWQDYAHRLS 471