Pairwise Alignments

Query, 474 a.a., exodeoxyribonuclease I from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., exonuclease I (RefSeq) from Shewanella amazonensis SB2B

 Score =  532 bits (1371), Expect = e-156
 Identities = 263/473 (55%), Positives = 337/473 (71%), Gaps = 4/473 (0%)

Query: 1   MQQEHQPTFFFFDYETWGVNPAKDRPSQFAGVRTDMDFNIIGEPLVIYCQLPNDYLPAPE 60
           M+   QPT F+ DYET+G +PAKDRP+QFAGVRTD+D NII EP+  YC+L  DYLPAPE
Sbjct: 1   MENYIQPTIFWHDYETFGASPAKDRPAQFAGVRTDLDLNIIDEPVTFYCRLSPDYLPAPE 60

Query: 61  AALITGITPQKANSQGLAEPEFIARIHAELSTPNTINLGYNSIRFDDEVTRYTCYRNFID 120
           A LITGITPQ AN QGL E EF+ RI A  S PNT   GYNS+RFDDEV+RY  YRNFID
Sbjct: 61  AILITGITPQLANRQGLPETEFMGRIQAIFSRPNTCVAGYNSLRFDDEVSRYGFYRNFID 120

Query: 121 PYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIEHSNAHD 180
           PYA  WQ GNSRWD++D++RAC+ALRPEGI WPE +DG  SFKLEHL+ ANG+ H  AHD
Sbjct: 121 PYAREWQQGNSRWDIIDLVRACYALRPEGINWPEKEDGSPSFKLEHLTAANGLGHDKAHD 180

Query: 181 AMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGMLGRERHY 240
           AM+DV ATI LA+ +K  QPKLFDY+F +R K+ + E ID++   PL+H+S  +   +  
Sbjct: 181 AMSDVYATIALARLIKEKQPKLFDYYFRLRRKQAVAEQIDVLAMQPLVHISSKIPATQGC 240

Query: 241 TSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELPVPVKLV 300
            + I P+A H  N+NAVI V+L  D QPL++LD + L+ RLYT+ EDLA DELPVPVK +
Sbjct: 241 ATLIAPVAHHMRNKNAVICVNLAMDIQPLIDLDVDALRTRLYTKREDLANDELPVPVKQI 300

Query: 301 HLNKCPILAPAKTLTAENAQKIGIDREQCLAHLNVIRQHPEIREKLVTVFSQEREFNQES 360
           HLNKCP +A AKTL   NA+++GID+        +++QHPEIREKL  +F +E +    +
Sbjct: 301 HLNKCPFVANAKTLDDANAERLGIDKAFAREQYRLLKQHPEIREKLTALFEEEPQ-GMSN 359

Query: 361 DVDSQLYA-GFFSPADRAAMEIIRTTAPENLGSLAIRVADKRIEPLLFRYRARHYPHTLT 419
           D D  LY+ GFFSPADRA M+IIR T+PE+L +L ++  D R+  +LFRYRAR+YP TL+
Sbjct: 360 DPDYSLYSGGFFSPADRAKMDIIRNTSPEHLAALELQFDDTRLPEMLFRYRARNYPLTLS 419

Query: 420 DTEQRRWAAHCRDYFERNLEGYMLNLENLVHEHQADPKKMAILKSVYHYVEKL 472
             E  RW   C+     N   Y++ LENL+ E   D KK  +L ++  Y++ L
Sbjct: 420 YDESLRWREFCQ--ARLNDPDYVIRLENLLEETTKDEKKQKLLGALCQYLQSL 470