Pairwise Alignments

Query, 474 a.a., exodeoxyribonuclease I from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., exonuclease I (RefSeq) from Shewanella loihica PV-4

 Score =  541 bits (1395), Expect = e-158
 Identities = 265/473 (56%), Positives = 344/473 (72%), Gaps = 4/473 (0%)

Query: 1   MQQEHQPTFFFFDYETWGVNPAKDRPSQFAGVRTDMDFNIIGEPLVIYCQLPNDYLPAPE 60
           M   + P+ F+ DYET+G NPAKDRPSQFAG+RTDMD NII EP+  YC+  +DYLP+PE
Sbjct: 13  MPANNLPSIFWHDYETFGANPAKDRPSQFAGIRTDMDLNIISEPVTFYCKQASDYLPSPE 72

Query: 61  AALITGITPQKANSQGLAEPEFIARIHAELSTPNTINLGYNSIRFDDEVTRYTCYRNFID 120
           A LITGITPQ AN +G+ E EF+ARI++E S PNT   GYNS+RFDDEVTRY  YRNF D
Sbjct: 73  AILITGITPQLANLKGMPEAEFMARINSEFSQPNTCVAGYNSLRFDDEVTRYGFYRNFFD 132

Query: 121 PYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIEHSNAHD 180
           PYA  WQ+GNSRWD++D++RAC+ALRPEGI WPE +DG  SFKLEHL+ AN + H  AHD
Sbjct: 133 PYAREWQNGNSRWDIIDLVRACYALRPEGINWPEKEDGSPSFKLEHLTQANNLSHDKAHD 192

Query: 181 AMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGMLGRERHY 240
           AM+DV ATI +AK +K  QPKLFDY+F +R K ++++ ID++N  PL+HVS  +      
Sbjct: 193 AMSDVYATIAMAKLIKERQPKLFDYYFNLRKKNEVSKQIDVLNMQPLIHVSSKISALHGC 252

Query: 241 TSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELPVPVKLV 300
           T+ I P+A H TN+NA+I V+L  D  PL+EL A+ ++ R+YT   DLA DELP+ +K +
Sbjct: 253 TTLIAPVAHHSTNKNAIICVNLAMDVTPLIELSADEIRERMYTPRVDLASDELPIGLKQL 312

Query: 301 HLNKCPILAPAKTLTAENAQKIGIDREQCLAHLNVIRQHPEIREKLVTVFSQEREFNQES 360
           H+NKCP +A AKTLT  NAQ++ ID+E   A    +RQHPEIREKLV VF  E   N+ S
Sbjct: 313 HINKCPFIATAKTLTDGNAQRLEIDKEFARAQYKRLRQHPEIREKLVAVFDTEHG-NEIS 371

Query: 361 DVDSQLYA-GFFSPADRAAMEIIRTTAPENLGSLAIRVADKRIEPLLFRYRARHYPHTLT 419
           D D QLY+ GFFS AD++ MEIIR TAP++L +L +   D+R+  +LFRYRAR+YP TL 
Sbjct: 372 DPDLQLYSGGFFSHADKSKMEIIRHTAPQHLAALELDFDDERLPEMLFRYRARNYPETLD 431

Query: 420 DTEQRRWAAHCRDYFERNLEGYMLNLENLVHEHQADPKKMAILKSVYHYVEKL 472
           DTEQ+RW   C+     N   YM+ LE LV++ +AD +K  +L ++ HY+  L
Sbjct: 432 DTEQQRWRTFCQS--RLNDPDYMIKLETLVNDTEADEEKQKLLTALCHYLSNL 482