Pairwise Alignments

Query, 474 a.a., exodeoxyribonuclease I from Vibrio cholerae E7946 ATCC 55056

Subject, 470 a.a., exodeoxyribonuclease I (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  504 bits (1299), Expect = e-147
 Identities = 246/473 (52%), Positives = 320/473 (67%), Gaps = 4/473 (0%)

Query: 1   MQQEHQPTFFFFDYETWGVNPAKDRPSQFAGVRTDMDFNIIGEPLVIYCQLPNDYLPAPE 60
           M    QP+ F+ DYET+G NPAKDRP+QFAG+RTD+D NII EP   YC+   DYLP+PE
Sbjct: 1   MYTASQPSIFWHDYETFGANPAKDRPAQFAGIRTDLDLNIISEPETFYCKQSTDYLPSPE 60

Query: 61  AALITGITPQKANSQGLAEPEFIARIHAELSTPNTINLGYNSIRFDDEVTRYTCYRNFID 120
           A LITGITPQ AN +GL E EF+ RIH   S  NT   GYNS+RFDDEVTRY  YRNFID
Sbjct: 61  AILITGITPQLANLKGLPETEFMGRIHTLFSQANTCVAGYNSLRFDDEVTRYGFYRNFID 120

Query: 121 PYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIEHSNAHD 180
           PYA  WQ+GN+RWD++D++RAC+A RP+GI WP  +DG  SFKLEHL+ ANG+ H  AHD
Sbjct: 121 PYAREWQNGNTRWDIIDLVRACYAFRPDGIHWPLKEDGSPSFKLEHLTQANGLSHEKAHD 180

Query: 181 AMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGMLGRERHY 240
           AM+DV ATI +AK +K  QPKL+ Y+F +R K+ ++  ID++N  PL HVS  +      
Sbjct: 181 AMSDVYATIAMAKLIKEKQPKLYQYYFELRRKQAVSAQIDVLNMQPLAHVSSKISAMHGC 240

Query: 241 TSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELPVPVKLV 300
           T+ I P+A HP+N+NA+I V+L  D  PL ELD E ++ R+YT   +LA DELP+PVK V
Sbjct: 241 TTLIAPVAHHPSNKNAIICVNLAMDLSPLFELDVEQIKTRMYTPRAELADDELPIPVKQV 300

Query: 301 HLNKCPILAPAKTLTAENAQKIGIDREQCLAHLNVIRQHPEIREKLVTVFSQEREFNQES 360
           HLNKCP +  AK L    A+++ ID+         ++ HPE+REKL  +F  + E    +
Sbjct: 301 HLNKCPFITSAKILDDAQAERLSIDKAFARGQYKRLKAHPELREKLAQLFEHDGEAT-TT 359

Query: 361 DVDSQLYA-GFFSPADRAAMEIIRTTAPENLGSLAIRVADKRIEPLLFRYRARHYPHTLT 419
           D D  LY+ GFFSPAD+A MEIIR T P+NL +L ++  D RI  +LFRYRAR+YP  L 
Sbjct: 360 DPDLMLYSGGFFSPADKAKMEIIRHTLPQNLAALDLQFDDGRIPEMLFRYRARNYPELLD 419

Query: 420 DTEQRRWAAHCRDYFERNLEGYMLNLENLVHEHQADPKKMAILKSVYHYVEKL 472
           D E  RW   C+       + Y+L LENL+ + + D  K  +L ++ HY+  L
Sbjct: 420 DQESHRWRTFCQQRLAD--QDYLLKLENLLQDTEGDEHKQKLLAALCHYLRGL 470