Pairwise Alignments

Query, 295 a.a., cytidine deaminase from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., Cytidine deaminase (EC 3.5.4.5) (from data) from Shewanella amazonensis SB2B

 Score =  239 bits (609), Expect = 7e-68
 Identities = 123/284 (43%), Positives = 177/284 (62%), Gaps = 1/284 (0%)

Query: 1   MRNRIEQALQQMPASFAPYLRELVLAKDFDATFSAEQYQQLLTLSGLEDADLRVALLPIA 60
           M++R  + + ++P + A  L  + L + F     A+Q +QL  +S ++  +L +ALLPIA
Sbjct: 1   MQDRFVRRINELPKALADELLPM-LGEQFCGHLDAQQVKQLCAVSAMDSHELGLALLPIA 59

Query: 61  AAYSYAPISEFYVGAIVRGISGRLYLGANMEFTGAQLGQTVHAEQCAISHAWMKGEKGVA 120
           AA +  P+S FYVGAI  G  G  Y+GAN+E  G  L  +VHAEQ AISHAW+ GE  ++
Sbjct: 60  AALAKPPVSNFYVGAIAVGSGGDFYMGANLELQGEALFHSVHAEQSAISHAWLSGETQIS 119

Query: 121 DITINFSPCGHCRQFMNELTTASSLKIQLPKRAAKTLQEYLPESFGPADLGIDSGLMSPV 180
           DI +N SPCGHCRQFMNEL    +++I LP +    L  YLP +FGPADL + + L+S  
Sbjct: 120 DIIVNASPCGHCRQFMNELVQGQAIRIHLPGQDTAPLSHYLPYAFGPADLNVTAPLLSKQ 179

Query: 181 NHGKTSDDDEELIQQALRAMNISHSPYTQNFSGVALKMRSGAIYLGAYAENAAFNPSLPP 240
                 + D+ L+ +AL    +S++PY+Q  + V L+   GA + G YAENAAFNPS+ P
Sbjct: 180 QTELVLESDDPLLIEALDHAGLSYAPYSQCHAAVVLETEDGASFCGRYAENAAFNPSMLP 239

Query: 241 LQVALAQAMMMGESFEDIEAAALVESATGKISHLADTQATLEVI 284
           +Q+AL+  +    SF DI+ A L+ES+ GKIS +  T   L  +
Sbjct: 240 MQMALSALVRHNRSFSDIKRAVLLESSQGKISLVGATMDALHAV 283