Pairwise Alignments

Query, 295 a.a., cytidine deaminase from Vibrio cholerae E7946 ATCC 55056

Subject, 137 a.a., cytidine deaminase from Dyella japonica UNC79MFTsu3.2

 Score = 52.0 bits (123), Expect = 7e-12
 Identities = 46/127 (36%), Positives = 58/127 (45%), Gaps = 15/127 (11%)

Query: 51  DLRVALLPIAAAYSYAPISEFYVGAIVRGISGRLYLGANMEFTGAQLGQTVHAEQCAISH 110
           D  V L   A   +YAP S F VGA +    GR +LG N+E   A  G    AE+ A+  
Sbjct: 8   DPLVELARQAREQAYAPYSRFLVGAALLTRDGRHFLGCNVE--NASYGLCNCAERTALFS 65

Query: 111 AWMKGEKG--------VADITINFSPCGHCRQFMNELTTASSLKIQLPKRAAK----TLQ 158
           A   G K         + D     SPCG CRQ M+EL    S+ + L     K    T++
Sbjct: 66  AIAAGCKPGDFVRLAVIGDTEGPISPCGACRQVMDELCD-QSMPVLLANLHGKLQETTVK 124

Query: 159 EYLPESF 165
           E LP SF
Sbjct: 125 ELLPGSF 131



 Score = 37.7 bits (86), Expect = 1e-07
 Identities = 24/83 (28%), Positives = 40/83 (48%)

Query: 190 EELIQQALRAMNISHSPYTQNFSGVALKMRSGAIYLGAYAENAAFNPSLPPLQVALAQAM 249
           + L++ A +A   +++PY++   G AL  R G  +LG   ENA++       + AL  A+
Sbjct: 8   DPLVELARQAREQAYAPYSRFLVGAALLTRDGRHFLGCNVENASYGLCNCAERTALFSAI 67

Query: 250 MMGESFEDIEAAALVESATGKIS 272
             G    D    A++    G IS
Sbjct: 68  AAGCKPGDFVRLAVIGDTEGPIS 90