Pairwise Alignments

Query, 295 a.a., cytidine deaminase from Vibrio cholerae E7946 ATCC 55056

Subject, 296 a.a., Cytidine deaminase (EC 3.5.4.5) (from data) from Shewanella sp. ANA-3

 Score =  242 bits (617), Expect = 8e-69
 Identities = 126/284 (44%), Positives = 177/284 (62%), Gaps = 1/284 (0%)

Query: 1   MRNRIEQALQQMPASFAPYLRELVLAKDFDATFSAEQYQQLLTLSGLEDADLRVALLPIA 60
           M++R  +++ Q+P   A  L  L L ++F     A+Q  +L+  S + +A++ +ALLPIA
Sbjct: 1   MQDRFIKSITQLPTPLADALIPL-LHQNFAGHIDAQQLAELVQSSKMTEAEVLLALLPIA 59

Query: 61  AAYSYAPISEFYVGAIVRGISGRLYLGANMEFTGAQLGQTVHAEQCAISHAWMKGEKGVA 120
           AA +  PISEFYVGAI +G SG +Y+GAN+E  G  L  +VHAEQ AISHAW+ GE  + 
Sbjct: 60  AALAKPPISEFYVGAIAKGKSGDIYMGANLELLGEALFHSVHAEQSAISHAWLSGESQIV 119

Query: 121 DITINFSPCGHCRQFMNELTTASSLKIQLPKRAAKTLQEYLPESFGPADLGIDSGLMSPV 180
           D+ +N SPCGHCRQFMNEL     +KI LP + +  L  YLP +FGP DL + S L+   
Sbjct: 120 DMIVNASPCGHCRQFMNELVEGGQIKIHLPSQDSHLLSYYLPYAFGPKDLNVQSPLLVKQ 179

Query: 181 NHGKTSDDDEELIQQALRAMNISHSPYTQNFSGVALKMRSGAIYLGAYAENAAFNPSLPP 240
                 D  + ++ +AL    +S++PYTQ+++ V L+   GA Y G YAENAAFNPS+ P
Sbjct: 180 ETEFALDSSDPMVIEALDHAGLSYAPYTQSYAAVVLETADGATYCGRYAENAAFNPSMLP 239

Query: 241 LQVALAQAMMMGESFEDIEAAALVESATGKISHLADTQATLEVI 284
           +Q+AL+        F +I  A LVES+ GKIS +  T   L  +
Sbjct: 240 MQMALSNLTRHNRDFGEIRRAVLVESSQGKISLVGATMDALHAV 283