Pairwise Alignments

Query, 291 a.a., AEC family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., AEC family transporter from Methanococcus maripaludis JJ

 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 72/302 (23%), Positives = 136/302 (45%), Gaps = 26/302 (8%)

Query: 5   IIAILFPVMSLVLIGYL---IGLWLKPDFRPINRINMEAFVPALVFSSLV------NMPL 55
           I+ I++ ++ L+LIGY+     +  + D   +N+I +   +PA +F  L+      ++P 
Sbjct: 3   IMEIMYVIVFLILIGYISRHFKILDEKDRMVLNKIVIYIAMPATIFLQLLTNVTPSDLPE 62

Query: 56  DTQQTPLLLAALVAVLLPGILMLLICRLGRWSFKTWAPLHMFRNSGNLAIPLFTYAFGET 115
             +   ++  +  A  L   ++    +L   S   +  +    N+G L  P+    +GE 
Sbjct: 63  FMKLPIIIFISTAACALLAYIVGKRLKLDNKSLGGFVLVASIGNTGFLGYPVILGFYGEQ 122

Query: 116 ALPSAVL----LFVVSMCLHISLGVAML-SKGSVLKTVLSAPVFLASSLALLLNLSGV-- 168
            L  A+         SM L   +GV +  +K S+LK V + P        L+L L  V  
Sbjct: 123 GLLRAIFCDMSAIFCSMLLGTYIGVKLSGAKKSILKEVFTFPPLFTGIFTLILVLLHVNL 182

Query: 169 SIWSPLY-NATALLGQAAVPVMLLSLGSQMINLRLAGLKVG-----LVSTAQSLLTGACA 222
           SI+   +  +   +  A +P+++LSLG   ++L     K G     L S  + +++   A
Sbjct: 183 SIFPEFFTKSLEYMSSATIPLIMLSLG---LSLSPKAAKFGIFYGILASIFRMVISPLVA 239

Query: 223 FTVIYFFIPLPPLQLQMMVLFTMLPPAVMNYLFAERYHIEPTQVAAMVLFGNFFSLLSLP 282
           F +    +    L  Q+ ++ + +P A+M  ++A  Y ++   VA+        SL +LP
Sbjct: 240 FPISESILS-NQLDKQVTIMQSAMPSAMMPLVYAVIYDLDVKLVASACFVSTVVSLFALP 298

Query: 283 IL 284
           IL
Sbjct: 299 IL 300